Gene : Bradi1g42620 B. distachyon v3.1
Defline:  (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE Genomic Order:  5234
Name:  ? Bradi1g42620 Secondary Identifier:  ? PAC:32797512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42620 0.5kb upstream 0.5kb upstream 6832 true Bd1: 40070027-40076858 Brachypodium distachyon
Bradi1g42620 0.5kb upstream 0.5kb upstream 500 false Bd1: 40070027-40070526 Brachypodium distachyon
Bradi1g42620 0.5kb downstream 0.5kb downstream 6832 true Bd1: 40070527-40077358 Brachypodium distachyon
Bradi1g42620 0.5kb downstream 0.5kb downstream 500 false Bd1: 40076859-40077358 Brachypodium distachyon
Bradi1g42620 1.0kb upstream 1.0kb upstream 7332 true Bd1: 40069527-40076858 Brachypodium distachyon
Bradi1g42620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40069527-40070526 Brachypodium distachyon
Bradi1g42620 1.0kb downstream 1.0kb downstream 7332 true Bd1: 40070527-40077858 Brachypodium distachyon
Bradi1g42620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40076859-40077858 Brachypodium distachyon
Bradi1g42620 2.0kb upstream 2.0kb upstream 8332 true Bd1: 40068527-40076858 Brachypodium distachyon
Bradi1g42620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40068527-40070526 Brachypodium distachyon
Bradi1g42620 2.0kb downstream 2.0kb downstream 8332 true Bd1: 40070527-40078858 Brachypodium distachyon
Bradi1g42620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40076859-40078858 Brachypodium distachyon
Bradi1g42620 5.0kb upstream 5.0kb upstream 11332 true Bd1: 40065527-40076858 Brachypodium distachyon
Bradi1g42620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40065527-40070526 Brachypodium distachyon
Bradi1g42620 5.0kb downstream 5.0kb downstream 11332 true Bd1: 40070527-40081858 Brachypodium distachyon
Bradi1g42620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40076859-40081858 Brachypodium distachyon
Bradi1g42620 10.0kb upstream 10.0kb upstream 16332 true Bd1: 40060527-40076858 Brachypodium distachyon
Bradi1g42620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40060527-40070526 Brachypodium distachyon
Bradi1g42620 10.0kb downstream 10.0kb downstream 16332 true Bd1: 40070527-40086858 Brachypodium distachyon
Bradi1g42620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40076859-40086858 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577424 5269 Grass View MSA
122042661 5273 Angiosperm View MSA
121343944 5274 Embryophyte View MSA
123428038 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.069        
cufflinks 5.982        
cufflinks 6.173        
cufflinks 6.51        
cufflinks 10.087     High High
cufflinks 5.346        
cufflinks 5.197        
cufflinks 6.135        
cufflinks 5.642        
cufflinks 5.121        
cufflinks 5.469        
cufflinks 5.033        
cufflinks 3.803       Low
cufflinks 4.598       Low
cufflinks 8.47        
cufflinks 5.336        
cufflinks 7.304        
cufflinks 10.353       High
cufflinks 10.472       High
cufflinks 14.024     High High
cufflinks 8.289        
cufflinks 5.467        
cufflinks 6.856        
cufflinks 5.812        
cufflinks 5.599        
cufflinks 6.196        
cufflinks 6.114        
cufflinks 6.263        
cufflinks 5.85        
cufflinks 6.619        

0 Strain