Gene : Bradi5g20557 B. distachyon v3.1
Defline:  (1 of 5) 1.10.3.11 - Ubiquinol oxidase (non-electrogenic) / Ubiquinol oxidase Genomic Order:  2390
Name:  ? Bradi5g20557 Secondary Identifier:  ? PAC:32807284
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-4302 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g20557 0.5kb upstream 0.5kb upstream 2310 true Bd5: 23565521-23567830 Brachypodium distachyon
Bradi5g20557 0.5kb upstream 0.5kb upstream 500 false Bd5: 23567331-23567830 Brachypodium distachyon
Bradi5g20557 0.5kb downstream 0.5kb downstream 2310 true Bd5: 23565021-23567330 Brachypodium distachyon
Bradi5g20557 0.5kb downstream 0.5kb downstream 500 false Bd5: 23565021-23565520 Brachypodium distachyon
Bradi5g20557 1.0kb upstream 1.0kb upstream 2810 true Bd5: 23565521-23568330 Brachypodium distachyon
Bradi5g20557 1.0kb upstream 1.0kb upstream 1000 false Bd5: 23567331-23568330 Brachypodium distachyon
Bradi5g20557 1.0kb downstream 1.0kb downstream 2810 true Bd5: 23564521-23567330 Brachypodium distachyon
Bradi5g20557 1.0kb downstream 1.0kb downstream 1000 false Bd5: 23564521-23565520 Brachypodium distachyon
Bradi5g20557 2.0kb upstream 2.0kb upstream 3810 true Bd5: 23565521-23569330 Brachypodium distachyon
Bradi5g20557 2.0kb upstream 2.0kb upstream 2000 false Bd5: 23567331-23569330 Brachypodium distachyon
Bradi5g20557 2.0kb downstream 2.0kb downstream 3810 true Bd5: 23563521-23567330 Brachypodium distachyon
Bradi5g20557 2.0kb downstream 2.0kb downstream 2000 false Bd5: 23563521-23565520 Brachypodium distachyon
Bradi5g20557 5.0kb upstream 5.0kb upstream 6810 true Bd5: 23565521-23572330 Brachypodium distachyon
Bradi5g20557 5.0kb upstream 5.0kb upstream 5000 false Bd5: 23567331-23572330 Brachypodium distachyon
Bradi5g20557 5.0kb downstream 5.0kb downstream 6810 true Bd5: 23560521-23567330 Brachypodium distachyon
Bradi5g20557 5.0kb downstream 5.0kb downstream 5000 false Bd5: 23560521-23565520 Brachypodium distachyon
Bradi5g20557 10.0kb upstream 10.0kb upstream 11810 true Bd5: 23565521-23577330 Brachypodium distachyon
Bradi5g20557 10.0kb upstream 10.0kb upstream 10000 false Bd5: 23567331-23577330 Brachypodium distachyon
Bradi5g20557 10.0kb downstream 10.0kb downstream 11810 true Bd5: 23555521-23567330 Brachypodium distachyon
Bradi5g20557 10.0kb downstream 10.0kb downstream 10000 false Bd5: 23555521-23565520 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585817 5269 Grass View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.128        
cufflinks 0.116       Low
cufflinks 0.337        
cufflinks 0.134       Low
cufflinks 5.054       High
cufflinks 0.097       Low
cufflinks 0.226        
cufflinks 0.646        
cufflinks 0.321        
cufflinks 0.196        
cufflinks 4.197       High
cufflinks 1.708        
cufflinks 0.28        
cufflinks 0.608        
cufflinks 3.876       High
cufflinks 0.353        
cufflinks 0.587        
cufflinks 6.953       High
cufflinks 21.398     High High
cufflinks 8.704       High
cufflinks 0.222        
cufflinks 0.151        
cufflinks 0.461        
cufflinks 0.187        
cufflinks 0.118       Low
cufflinks 0.239        
cufflinks 1.329        
cufflinks 0.343        
cufflinks 0.341        
cufflinks 0.23        

0 Strain