Gene : Bradi1g42770 B. distachyon v3.1
Defline:  (1 of 7) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  5254
Name:  ? Bradi1g42770 Secondary Identifier:  ? PAC:32800804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42770 0.5kb upstream 0.5kb upstream 5713 true Bd1: 40226200-40231912 Brachypodium distachyon
Bradi1g42770 0.5kb upstream 0.5kb upstream 500 false Bd1: 40231413-40231912 Brachypodium distachyon
Bradi1g42770 0.5kb downstream 0.5kb downstream 5713 true Bd1: 40225700-40231412 Brachypodium distachyon
Bradi1g42770 0.5kb downstream 0.5kb downstream 500 false Bd1: 40225700-40226199 Brachypodium distachyon
Bradi1g42770 1.0kb upstream 1.0kb upstream 6213 true Bd1: 40226200-40232412 Brachypodium distachyon
Bradi1g42770 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40231413-40232412 Brachypodium distachyon
Bradi1g42770 1.0kb downstream 1.0kb downstream 6213 true Bd1: 40225200-40231412 Brachypodium distachyon
Bradi1g42770 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40225200-40226199 Brachypodium distachyon
Bradi1g42770 2.0kb upstream 2.0kb upstream 7213 true Bd1: 40226200-40233412 Brachypodium distachyon
Bradi1g42770 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40231413-40233412 Brachypodium distachyon
Bradi1g42770 2.0kb downstream 2.0kb downstream 7213 true Bd1: 40224200-40231412 Brachypodium distachyon
Bradi1g42770 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40224200-40226199 Brachypodium distachyon
Bradi1g42770 5.0kb upstream 5.0kb upstream 10213 true Bd1: 40226200-40236412 Brachypodium distachyon
Bradi1g42770 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40231413-40236412 Brachypodium distachyon
Bradi1g42770 5.0kb downstream 5.0kb downstream 10213 true Bd1: 40221200-40231412 Brachypodium distachyon
Bradi1g42770 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40221200-40226199 Brachypodium distachyon
Bradi1g42770 10.0kb upstream 10.0kb upstream 15213 true Bd1: 40226200-40241412 Brachypodium distachyon
Bradi1g42770 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40231413-40241412 Brachypodium distachyon
Bradi1g42770 10.0kb downstream 10.0kb downstream 15213 true Bd1: 40216200-40231412 Brachypodium distachyon
Bradi1g42770 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40216200-40226199 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578668 5269 Grass View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.24        
cufflinks 0.311        
cufflinks 0.38        
cufflinks 0.282        
cufflinks 0.298        
cufflinks 0.278        
cufflinks 0.25        
cufflinks 0.261        
cufflinks 0.242        
cufflinks 0.27        
cufflinks 0.171        
cufflinks 0.227        
cufflinks 0.11       Low
cufflinks 0.127       Low
cufflinks 0.174        
cufflinks 0.298        
cufflinks 0.223        
cufflinks 0.568       High
cufflinks 0.424        
cufflinks 0.076     Low Low
cufflinks 0.504       High
cufflinks 0.393        
cufflinks 0.253        
cufflinks 0.315        
cufflinks 0.295        
cufflinks 0.401        
cufflinks 0.188        
cufflinks 0.327        
cufflinks 0.361        
cufflinks 0.493       High

0 Strain