Gene : Bradi5g20780 B. distachyon v3.1
Defline:  (1 of 1) 2.1.1.100 - Protein-S-isoprenylcysteine O-methyltransferase / Prenylcysteine carboxyl methyltransferase Genomic Order:  2417
Name:  ? Bradi5g20780 Secondary Identifier:  ? PAC:32809686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g20780 0.5kb upstream 0.5kb upstream 4226 true Bd5: 23732009-23736234 Brachypodium distachyon
Bradi5g20780 0.5kb upstream 0.5kb upstream 500 false Bd5: 23735735-23736234 Brachypodium distachyon
Bradi5g20780 0.5kb downstream 0.5kb downstream 4226 true Bd5: 23731509-23735734 Brachypodium distachyon
Bradi5g20780 0.5kb downstream 0.5kb downstream 500 false Bd5: 23731509-23732008 Brachypodium distachyon
Bradi5g20780 1.0kb upstream 1.0kb upstream 4726 true Bd5: 23732009-23736734 Brachypodium distachyon
Bradi5g20780 1.0kb upstream 1.0kb upstream 1000 false Bd5: 23735735-23736734 Brachypodium distachyon
Bradi5g20780 1.0kb downstream 1.0kb downstream 4726 true Bd5: 23731009-23735734 Brachypodium distachyon
Bradi5g20780 1.0kb downstream 1.0kb downstream 1000 false Bd5: 23731009-23732008 Brachypodium distachyon
Bradi5g20780 2.0kb upstream 2.0kb upstream 5726 true Bd5: 23732009-23737734 Brachypodium distachyon
Bradi5g20780 2.0kb upstream 2.0kb upstream 2000 false Bd5: 23735735-23737734 Brachypodium distachyon
Bradi5g20780 2.0kb downstream 2.0kb downstream 5726 true Bd5: 23730009-23735734 Brachypodium distachyon
Bradi5g20780 2.0kb downstream 2.0kb downstream 2000 false Bd5: 23730009-23732008 Brachypodium distachyon
Bradi5g20780 5.0kb upstream 5.0kb upstream 8726 true Bd5: 23732009-23740734 Brachypodium distachyon
Bradi5g20780 5.0kb upstream 5.0kb upstream 5000 false Bd5: 23735735-23740734 Brachypodium distachyon
Bradi5g20780 5.0kb downstream 5.0kb downstream 8726 true Bd5: 23727009-23735734 Brachypodium distachyon
Bradi5g20780 5.0kb downstream 5.0kb downstream 5000 false Bd5: 23727009-23732008 Brachypodium distachyon
Bradi5g20780 10.0kb upstream 10.0kb upstream 13726 true Bd5: 23732009-23745734 Brachypodium distachyon
Bradi5g20780 10.0kb upstream 10.0kb upstream 10000 false Bd5: 23735735-23745734 Brachypodium distachyon
Bradi5g20780 10.0kb downstream 10.0kb downstream 13726 true Bd5: 23722009-23735734 Brachypodium distachyon
Bradi5g20780 10.0kb downstream 10.0kb downstream 10000 false Bd5: 23722009-23732008 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590185 5269 Grass View MSA
122050758 5273 Angiosperm View MSA
121345663 5274 Embryophyte View MSA
123424418 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.782       Low
cufflinks 1.754        
cufflinks 1.72        
cufflinks 1.914        
cufflinks 0.957       Low
cufflinks 1.709        
cufflinks 1.913        
cufflinks 1.684        
cufflinks 1.803        
cufflinks 1.69        
cufflinks 1.433        
cufflinks 1.798        
cufflinks 1.718        
cufflinks 1.513        
cufflinks 1.35        
cufflinks 1.769        
cufflinks 1.386        
cufflinks 2.025        
cufflinks 0.894       Low
cufflinks 0.955       Low
cufflinks 2.426       High
cufflinks 1.606        
cufflinks 1.643        
cufflinks 1.81        
cufflinks 2.063        
cufflinks 1.886        
cufflinks 2.319       High
cufflinks 1.643        
cufflinks 1.665        
cufflinks 2.016        

0 Strain