Gene : Bradi1g42990 B. distachyon v3.1
Defline:  (1 of 1) PTHR12668//PTHR12668:SF18 - TRANSMEMBRANE PROTEIN 14, 15 Genomic Order:  5283
Name:  ? Bradi1g42990 Secondary Identifier:  ? PAC:32802153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42990 0.5kb upstream 0.5kb upstream 4154 true Bd1: 40599600-40603753 Brachypodium distachyon
Bradi1g42990 0.5kb upstream 0.5kb upstream 500 false Bd1: 40599600-40600099 Brachypodium distachyon
Bradi1g42990 0.5kb downstream 0.5kb downstream 4154 true Bd1: 40600100-40604253 Brachypodium distachyon
Bradi1g42990 0.5kb downstream 0.5kb downstream 500 false Bd1: 40603754-40604253 Brachypodium distachyon
Bradi1g42990 1.0kb upstream 1.0kb upstream 4654 true Bd1: 40599100-40603753 Brachypodium distachyon
Bradi1g42990 1.0kb upstream 1.0kb upstream 1000 false Bd1: 40599100-40600099 Brachypodium distachyon
Bradi1g42990 1.0kb downstream 1.0kb downstream 4654 true Bd1: 40600100-40604753 Brachypodium distachyon
Bradi1g42990 1.0kb downstream 1.0kb downstream 1000 false Bd1: 40603754-40604753 Brachypodium distachyon
Bradi1g42990 2.0kb upstream 2.0kb upstream 5654 true Bd1: 40598100-40603753 Brachypodium distachyon
Bradi1g42990 2.0kb upstream 2.0kb upstream 2000 false Bd1: 40598100-40600099 Brachypodium distachyon
Bradi1g42990 2.0kb downstream 2.0kb downstream 5654 true Bd1: 40600100-40605753 Brachypodium distachyon
Bradi1g42990 2.0kb downstream 2.0kb downstream 2000 false Bd1: 40603754-40605753 Brachypodium distachyon
Bradi1g42990 5.0kb upstream 5.0kb upstream 8654 true Bd1: 40595100-40603753 Brachypodium distachyon
Bradi1g42990 5.0kb upstream 5.0kb upstream 5000 false Bd1: 40595100-40600099 Brachypodium distachyon
Bradi1g42990 5.0kb downstream 5.0kb downstream 8654 true Bd1: 40600100-40608753 Brachypodium distachyon
Bradi1g42990 5.0kb downstream 5.0kb downstream 5000 false Bd1: 40603754-40608753 Brachypodium distachyon
Bradi1g42990 10.0kb upstream 10.0kb upstream 13654 true Bd1: 40590100-40603753 Brachypodium distachyon
Bradi1g42990 10.0kb upstream 10.0kb upstream 10000 false Bd1: 40590100-40600099 Brachypodium distachyon
Bradi1g42990 10.0kb downstream 10.0kb downstream 13654 true Bd1: 40600100-40613753 Brachypodium distachyon
Bradi1g42990 10.0kb downstream 10.0kb downstream 10000 false Bd1: 40603754-40613753 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576629 5269 Grass View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.639        
cufflinks 5.12        
cufflinks 7.042        
cufflinks 6.408        
cufflinks 13.845     High High
cufflinks 4.59        
cufflinks 4.879        
cufflinks 5.163        
cufflinks 4.568        
cufflinks 4.778        
cufflinks 3.669       Low
cufflinks 3.58       Low
cufflinks 2.41       Low
cufflinks 3.197       Low
cufflinks 5.338        
cufflinks 4.629        
cufflinks 6.666        
cufflinks 11.345       High
cufflinks 14.318     High High
cufflinks 14.597     High High
cufflinks 8.103        
cufflinks 4.648        
cufflinks 5.105        
cufflinks 4.97        
cufflinks 4.484        
cufflinks 6.322        
cufflinks 3.739       Low
cufflinks 6.056        
cufflinks 5.613        
cufflinks 5.877        

0 Strain