Gene : Bradi5g19820 B. distachyon v3.1
Genomic Order:  2295 Name:  ? Bradi5g19820
Secondary Identifier:  ? PAC:32810510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g19820 0.5kb upstream 0.5kb upstream 2882 true Bd5: 22904178-22907059 Brachypodium distachyon
Bradi5g19820 0.5kb upstream 0.5kb upstream 500 false Bd5: 22904178-22904677 Brachypodium distachyon
Bradi5g19820 0.5kb downstream 0.5kb downstream 2882 true Bd5: 22904678-22907559 Brachypodium distachyon
Bradi5g19820 0.5kb downstream 0.5kb downstream 500 false Bd5: 22907060-22907559 Brachypodium distachyon
Bradi5g19820 1.0kb upstream 1.0kb upstream 3382 true Bd5: 22903678-22907059 Brachypodium distachyon
Bradi5g19820 1.0kb upstream 1.0kb upstream 1000 false Bd5: 22903678-22904677 Brachypodium distachyon
Bradi5g19820 1.0kb downstream 1.0kb downstream 3382 true Bd5: 22904678-22908059 Brachypodium distachyon
Bradi5g19820 1.0kb downstream 1.0kb downstream 1000 false Bd5: 22907060-22908059 Brachypodium distachyon
Bradi5g19820 2.0kb upstream 2.0kb upstream 4382 true Bd5: 22902678-22907059 Brachypodium distachyon
Bradi5g19820 2.0kb upstream 2.0kb upstream 2000 false Bd5: 22902678-22904677 Brachypodium distachyon
Bradi5g19820 2.0kb downstream 2.0kb downstream 4382 true Bd5: 22904678-22909059 Brachypodium distachyon
Bradi5g19820 2.0kb downstream 2.0kb downstream 2000 false Bd5: 22907060-22909059 Brachypodium distachyon
Bradi5g19820 5.0kb upstream 5.0kb upstream 7382 true Bd5: 22899678-22907059 Brachypodium distachyon
Bradi5g19820 5.0kb upstream 5.0kb upstream 5000 false Bd5: 22899678-22904677 Brachypodium distachyon
Bradi5g19820 5.0kb downstream 5.0kb downstream 7382 true Bd5: 22904678-22912059 Brachypodium distachyon
Bradi5g19820 5.0kb downstream 5.0kb downstream 5000 false Bd5: 22907060-22912059 Brachypodium distachyon
Bradi5g19820 10.0kb upstream 10.0kb upstream 12382 true Bd5: 22894678-22907059 Brachypodium distachyon
Bradi5g19820 10.0kb upstream 10.0kb upstream 10000 false Bd5: 22894678-22904677 Brachypodium distachyon
Bradi5g19820 10.0kb downstream 10.0kb downstream 12382 true Bd5: 22904678-22917059 Brachypodium distachyon
Bradi5g19820 10.0kb downstream 10.0kb downstream 10000 false Bd5: 22907060-22917059 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028162 5273 Angiosperm View MSA
124589577 5269 Grass View MSA
121297693 5274 Embryophyte View MSA
123335723 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.87        
cufflinks 4.795        
cufflinks 8.952        
cufflinks 6.978        
cufflinks 12.659     High  
cufflinks 3.05       Low
cufflinks 3.698       Low
cufflinks 5.069        
cufflinks 2.823       Low
cufflinks 19.485     High High
cufflinks 6.903        
cufflinks 5.647        
cufflinks 3.121       Low
cufflinks 3.484       Low
cufflinks 9.187     High  
cufflinks 4.279        
cufflinks 8.112        
cufflinks 12.333     High  
cufflinks 44.477     High High
cufflinks 18.575     High High
cufflinks 17.418     High High
cufflinks 9.52        
cufflinks 4.448        
cufflinks 3.877       Low
cufflinks 4.022       Low
cufflinks 11.593     High  
cufflinks 4.066       Low
cufflinks 15.93     High  
cufflinks 14.874     High  
cufflinks 6.447        

0 Strain