Gene : Bradi5g19270 B. distachyon v3.1
Defline:  (1 of 1) PTHR22814:SF49 - HEAVY METAL ASSOCIATED DOMAIN-CONTAINING PROTEIN Genomic Order:  2231
Name:  ? Bradi5g19270 Secondary Identifier:  ? PAC:32808637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g19270 0.5kb upstream 0.5kb upstream 1578 true Bd5: 22465695-22467272 Brachypodium distachyon
Bradi5g19270 0.5kb upstream 0.5kb upstream 500 false Bd5: 22466773-22467272 Brachypodium distachyon
Bradi5g19270 0.5kb downstream 0.5kb downstream 1578 true Bd5: 22465195-22466772 Brachypodium distachyon
Bradi5g19270 0.5kb downstream 0.5kb downstream 500 false Bd5: 22465195-22465694 Brachypodium distachyon
Bradi5g19270 1.0kb upstream 1.0kb upstream 2078 true Bd5: 22465695-22467772 Brachypodium distachyon
Bradi5g19270 1.0kb upstream 1.0kb upstream 1000 false Bd5: 22466773-22467772 Brachypodium distachyon
Bradi5g19270 1.0kb downstream 1.0kb downstream 2078 true Bd5: 22464695-22466772 Brachypodium distachyon
Bradi5g19270 1.0kb downstream 1.0kb downstream 1000 false Bd5: 22464695-22465694 Brachypodium distachyon
Bradi5g19270 2.0kb upstream 2.0kb upstream 3078 true Bd5: 22465695-22468772 Brachypodium distachyon
Bradi5g19270 2.0kb upstream 2.0kb upstream 2000 false Bd5: 22466773-22468772 Brachypodium distachyon
Bradi5g19270 2.0kb downstream 2.0kb downstream 3078 true Bd5: 22463695-22466772 Brachypodium distachyon
Bradi5g19270 2.0kb downstream 2.0kb downstream 2000 false Bd5: 22463695-22465694 Brachypodium distachyon
Bradi5g19270 5.0kb upstream 5.0kb upstream 6078 true Bd5: 22465695-22471772 Brachypodium distachyon
Bradi5g19270 5.0kb upstream 5.0kb upstream 5000 false Bd5: 22466773-22471772 Brachypodium distachyon
Bradi5g19270 5.0kb downstream 5.0kb downstream 6078 true Bd5: 22460695-22466772 Brachypodium distachyon
Bradi5g19270 5.0kb downstream 5.0kb downstream 5000 false Bd5: 22460695-22465694 Brachypodium distachyon
Bradi5g19270 10.0kb upstream 10.0kb upstream 11078 true Bd5: 22465695-22476772 Brachypodium distachyon
Bradi5g19270 10.0kb upstream 10.0kb upstream 10000 false Bd5: 22466773-22476772 Brachypodium distachyon
Bradi5g19270 10.0kb downstream 10.0kb downstream 11078 true Bd5: 22455695-22466772 Brachypodium distachyon
Bradi5g19270 10.0kb downstream 10.0kb downstream 10000 false Bd5: 22455695-22465694 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026736 5273 Angiosperm View MSA
124577304 5269 Grass View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558        
cufflinks 0.925        
cufflinks 0.726        
cufflinks 1.297        
cufflinks 9.656     High High
cufflinks 0.416        
cufflinks 1.092        
cufflinks 0.25        
cufflinks 0.547        
cufflinks 1.463        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.252        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.178       Low
cufflinks 0.437        
cufflinks 1.105        
cufflinks 0.963        
cufflinks 4.095       High
cufflinks 2.46        
cufflinks 4.838       High
cufflinks 0.495        
cufflinks 0.719        
cufflinks 0.219        
cufflinks 1.036        
cufflinks 1.578        
cufflinks 0.024     Low Low
cufflinks 1.837        
cufflinks 0.995        
cufflinks 1.852        

0 Strain