Gene : Bradi1g43417 B. distachyon v3.1
Defline:  (1 of 10) PF01636 - Phosphotransferase enzyme family (APH) Genomic Order:  5340
Name:  ? Bradi1g43417 Secondary Identifier:  ? PAC:32798632
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g43417 0.5kb upstream 0.5kb upstream 2479 true Bd1: 41300792-41303270 Brachypodium distachyon
Bradi1g43417 0.5kb upstream 0.5kb upstream 500 false Bd1: 41300792-41301291 Brachypodium distachyon
Bradi1g43417 0.5kb downstream 0.5kb downstream 2479 true Bd1: 41301292-41303770 Brachypodium distachyon
Bradi1g43417 0.5kb downstream 0.5kb downstream 500 false Bd1: 41303271-41303770 Brachypodium distachyon
Bradi1g43417 1.0kb upstream 1.0kb upstream 2979 true Bd1: 41300292-41303270 Brachypodium distachyon
Bradi1g43417 1.0kb upstream 1.0kb upstream 1000 false Bd1: 41300292-41301291 Brachypodium distachyon
Bradi1g43417 1.0kb downstream 1.0kb downstream 2979 true Bd1: 41301292-41304270 Brachypodium distachyon
Bradi1g43417 1.0kb downstream 1.0kb downstream 1000 false Bd1: 41303271-41304270 Brachypodium distachyon
Bradi1g43417 2.0kb upstream 2.0kb upstream 3979 true Bd1: 41299292-41303270 Brachypodium distachyon
Bradi1g43417 2.0kb upstream 2.0kb upstream 2000 false Bd1: 41299292-41301291 Brachypodium distachyon
Bradi1g43417 2.0kb downstream 2.0kb downstream 3979 true Bd1: 41301292-41305270 Brachypodium distachyon
Bradi1g43417 2.0kb downstream 2.0kb downstream 2000 false Bd1: 41303271-41305270 Brachypodium distachyon
Bradi1g43417 5.0kb upstream 5.0kb upstream 6979 true Bd1: 41296292-41303270 Brachypodium distachyon
Bradi1g43417 5.0kb upstream 5.0kb upstream 5000 false Bd1: 41296292-41301291 Brachypodium distachyon
Bradi1g43417 5.0kb downstream 5.0kb downstream 6979 true Bd1: 41301292-41308270 Brachypodium distachyon
Bradi1g43417 5.0kb downstream 5.0kb downstream 5000 false Bd1: 41303271-41308270 Brachypodium distachyon
Bradi1g43417 10.0kb upstream 10.0kb upstream 11979 true Bd1: 41291292-41303270 Brachypodium distachyon
Bradi1g43417 10.0kb upstream 10.0kb upstream 10000 false Bd1: 41291292-41301291 Brachypodium distachyon
Bradi1g43417 10.0kb downstream 10.0kb downstream 11979 true Bd1: 41301292-41313270 Brachypodium distachyon
Bradi1g43417 10.0kb downstream 10.0kb downstream 10000 false Bd1: 41303271-41313270 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574794 5269 Grass View MSA
122046333 5273 Angiosperm View MSA
121347860 5274 Embryophyte View MSA
123380655 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.513       High
cufflinks 1.409        
cufflinks 0.45        
cufflinks 0.734        
cufflinks 1.803        
cufflinks 1.763        
cufflinks 1.951        
cufflinks 1.182        
cufflinks 0.854        
cufflinks 0.897        
cufflinks 7.05       High
cufflinks 2.16        
cufflinks 1.112        
cufflinks 3.552        
cufflinks 7.881       High
cufflinks 2.326        
cufflinks 2.927        
cufflinks 0.116     Low Low
cufflinks 8.85       High
cufflinks 2.385        
cufflinks 0.214       Low
cufflinks 0.494        
cufflinks 0.786        
cufflinks 0.968        
cufflinks 1.224        
cufflinks 0.522        
cufflinks 1.765        
cufflinks 0.426        
cufflinks 0.651        
cufflinks 0.171       Low

0 Strain