Gene : Bradi1g47563 B. distachyon v3.1
Defline:  (1 of 1) PTHR21717:SF18 - HOMEODOMAIN-LIKE PROTEIN WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN Genomic Order:  5923
Name:  ? Bradi1g47563 Secondary Identifier:  ? PAC:32792114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47563 0.5kb upstream 0.5kb upstream 4314 true Bd1: 46369473-46373786 Brachypodium distachyon
Bradi1g47563 0.5kb upstream 0.5kb upstream 500 false Bd1: 46373287-46373786 Brachypodium distachyon
Bradi1g47563 0.5kb downstream 0.5kb downstream 4314 true Bd1: 46368973-46373286 Brachypodium distachyon
Bradi1g47563 0.5kb downstream 0.5kb downstream 500 false Bd1: 46368973-46369472 Brachypodium distachyon
Bradi1g47563 1.0kb upstream 1.0kb upstream 4814 true Bd1: 46369473-46374286 Brachypodium distachyon
Bradi1g47563 1.0kb upstream 1.0kb upstream 1000 false Bd1: 46373287-46374286 Brachypodium distachyon
Bradi1g47563 1.0kb downstream 1.0kb downstream 4814 true Bd1: 46368473-46373286 Brachypodium distachyon
Bradi1g47563 1.0kb downstream 1.0kb downstream 1000 false Bd1: 46368473-46369472 Brachypodium distachyon
Bradi1g47563 2.0kb upstream 2.0kb upstream 5814 true Bd1: 46369473-46375286 Brachypodium distachyon
Bradi1g47563 2.0kb upstream 2.0kb upstream 2000 false Bd1: 46373287-46375286 Brachypodium distachyon
Bradi1g47563 2.0kb downstream 2.0kb downstream 5814 true Bd1: 46367473-46373286 Brachypodium distachyon
Bradi1g47563 2.0kb downstream 2.0kb downstream 2000 false Bd1: 46367473-46369472 Brachypodium distachyon
Bradi1g47563 5.0kb upstream 5.0kb upstream 8814 true Bd1: 46369473-46378286 Brachypodium distachyon
Bradi1g47563 5.0kb upstream 5.0kb upstream 5000 false Bd1: 46373287-46378286 Brachypodium distachyon
Bradi1g47563 5.0kb downstream 5.0kb downstream 8814 true Bd1: 46364473-46373286 Brachypodium distachyon
Bradi1g47563 5.0kb downstream 5.0kb downstream 5000 false Bd1: 46364473-46369472 Brachypodium distachyon
Bradi1g47563 10.0kb upstream 10.0kb upstream 13814 true Bd1: 46369473-46383286 Brachypodium distachyon
Bradi1g47563 10.0kb upstream 10.0kb upstream 10000 false Bd1: 46373287-46383286 Brachypodium distachyon
Bradi1g47563 10.0kb downstream 10.0kb downstream 13814 true Bd1: 46359473-46373286 Brachypodium distachyon
Bradi1g47563 10.0kb downstream 10.0kb downstream 10000 false Bd1: 46359473-46369472 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571588 5269 Grass View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.208        
cufflinks 1.192        
cufflinks 1.259        
cufflinks 1.279        
cufflinks 1.34        
cufflinks 1.096        
cufflinks 1.028        
cufflinks 1.322        
cufflinks 1.149        
cufflinks 1.841        
cufflinks 1.056        
cufflinks 0.966        
cufflinks 0.686       Low
cufflinks 0.856       Low
cufflinks 0.62       Low
cufflinks 1.05        
cufflinks 1.962       High
cufflinks 1.643        
cufflinks 2.721       High
cufflinks 0.713       Low
cufflinks 2.042       High
cufflinks 1.465        
cufflinks 1.281        
cufflinks 1.067        
cufflinks 1.157        
cufflinks 1.461        
cufflinks 0.934        
cufflinks 1.562        
cufflinks 1.345        
cufflinks 1.568        

0 Strain