Gene : Bradi5g17040 B. distachyon v3.1
Genomic Order:  1956 Name:  ? Bradi5g17040
Secondary Identifier:  ? PAC:32809065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17040 0.5kb upstream 0.5kb upstream 8369 true Bd5: 20405649-20414017 Brachypodium distachyon
Bradi5g17040 0.5kb upstream 0.5kb upstream 500 false Bd5: 20413518-20414017 Brachypodium distachyon
Bradi5g17040 0.5kb downstream 0.5kb downstream 8369 true Bd5: 20405149-20413517 Brachypodium distachyon
Bradi5g17040 0.5kb downstream 0.5kb downstream 500 false Bd5: 20405149-20405648 Brachypodium distachyon
Bradi5g17040 1.0kb upstream 1.0kb upstream 8869 true Bd5: 20405649-20414517 Brachypodium distachyon
Bradi5g17040 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20413518-20414517 Brachypodium distachyon
Bradi5g17040 1.0kb downstream 1.0kb downstream 8869 true Bd5: 20404649-20413517 Brachypodium distachyon
Bradi5g17040 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20404649-20405648 Brachypodium distachyon
Bradi5g17040 2.0kb upstream 2.0kb upstream 9869 true Bd5: 20405649-20415517 Brachypodium distachyon
Bradi5g17040 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20413518-20415517 Brachypodium distachyon
Bradi5g17040 2.0kb downstream 2.0kb downstream 9869 true Bd5: 20403649-20413517 Brachypodium distachyon
Bradi5g17040 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20403649-20405648 Brachypodium distachyon
Bradi5g17040 5.0kb upstream 5.0kb upstream 12869 true Bd5: 20405649-20418517 Brachypodium distachyon
Bradi5g17040 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20413518-20418517 Brachypodium distachyon
Bradi5g17040 5.0kb downstream 5.0kb downstream 12869 true Bd5: 20400649-20413517 Brachypodium distachyon
Bradi5g17040 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20400649-20405648 Brachypodium distachyon
Bradi5g17040 10.0kb upstream 10.0kb upstream 17869 true Bd5: 20405649-20423517 Brachypodium distachyon
Bradi5g17040 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20413518-20423517 Brachypodium distachyon
Bradi5g17040 10.0kb downstream 10.0kb downstream 17869 true Bd5: 20395649-20413517 Brachypodium distachyon
Bradi5g17040 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20395649-20405648 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585156 5269 Grass View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.092       Low
cufflinks 0.214        
cufflinks 0.23        
cufflinks 0.231        
cufflinks 0.101       Low
cufflinks 0.157        
cufflinks 0.185        
cufflinks 0.12        
cufflinks 0.133        
cufflinks 0.27       High
cufflinks 0.104        
cufflinks 0.137        
cufflinks 0.069       Low
cufflinks 0.089       Low
cufflinks 0.091       Low
cufflinks 0.12        
cufflinks 0.193        
cufflinks 0.213        
cufflinks 0.114     Low  
cufflinks 0.099     Low Low
cufflinks 0.266       High
cufflinks 0.21        
cufflinks 0.141        
cufflinks 0.124        
cufflinks 0.183        
cufflinks 0.234        
cufflinks 0.118        
cufflinks 0.279       High
cufflinks 0.23        
cufflinks 0.191        

0 Strain