Gene : Bradi1g47730 B. distachyon v3.1
Defline:  (1 of 56) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  5958
Name:  ? Bradi1g47730 Secondary Identifier:  ? PAC:32804344
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47730 0.5kb upstream 0.5kb upstream 2606 true Bd1: 46616528-46619133 Brachypodium distachyon
Bradi1g47730 0.5kb upstream 0.5kb upstream 500 false Bd1: 46618634-46619133 Brachypodium distachyon
Bradi1g47730 0.5kb downstream 0.5kb downstream 2606 true Bd1: 46616028-46618633 Brachypodium distachyon
Bradi1g47730 0.5kb downstream 0.5kb downstream 500 false Bd1: 46616028-46616527 Brachypodium distachyon
Bradi1g47730 1.0kb upstream 1.0kb upstream 3106 true Bd1: 46616528-46619633 Brachypodium distachyon
Bradi1g47730 1.0kb upstream 1.0kb upstream 1000 false Bd1: 46618634-46619633 Brachypodium distachyon
Bradi1g47730 1.0kb downstream 1.0kb downstream 3106 true Bd1: 46615528-46618633 Brachypodium distachyon
Bradi1g47730 1.0kb downstream 1.0kb downstream 1000 false Bd1: 46615528-46616527 Brachypodium distachyon
Bradi1g47730 2.0kb upstream 2.0kb upstream 4106 true Bd1: 46616528-46620633 Brachypodium distachyon
Bradi1g47730 2.0kb upstream 2.0kb upstream 2000 false Bd1: 46618634-46620633 Brachypodium distachyon
Bradi1g47730 2.0kb downstream 2.0kb downstream 4106 true Bd1: 46614528-46618633 Brachypodium distachyon
Bradi1g47730 2.0kb downstream 2.0kb downstream 2000 false Bd1: 46614528-46616527 Brachypodium distachyon
Bradi1g47730 5.0kb upstream 5.0kb upstream 7106 true Bd1: 46616528-46623633 Brachypodium distachyon
Bradi1g47730 5.0kb upstream 5.0kb upstream 5000 false Bd1: 46618634-46623633 Brachypodium distachyon
Bradi1g47730 5.0kb downstream 5.0kb downstream 7106 true Bd1: 46611528-46618633 Brachypodium distachyon
Bradi1g47730 5.0kb downstream 5.0kb downstream 5000 false Bd1: 46611528-46616527 Brachypodium distachyon
Bradi1g47730 10.0kb upstream 10.0kb upstream 12106 true Bd1: 46616528-46628633 Brachypodium distachyon
Bradi1g47730 10.0kb upstream 10.0kb upstream 10000 false Bd1: 46618634-46628633 Brachypodium distachyon
Bradi1g47730 10.0kb downstream 10.0kb downstream 12106 true Bd1: 46606528-46618633 Brachypodium distachyon
Bradi1g47730 10.0kb downstream 10.0kb downstream 10000 false Bd1: 46606528-46616527 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575617 5269 Grass View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.498        
cufflinks 0.4        
cufflinks 0.607        
cufflinks 0.529        
cufflinks 3.09       High
cufflinks 0.38        
cufflinks 0.453        
cufflinks 0.667        
cufflinks 0.49        
cufflinks 0.706        
cufflinks 0.386        
cufflinks 0.257       Low
cufflinks 0.444        
cufflinks 0.318        
cufflinks 1.008        
cufflinks 0.276        
cufflinks 0.471        
cufflinks 5.628       High
cufflinks 0.507        
cufflinks 1.591       High
cufflinks 1.844       High
cufflinks 0.63        
cufflinks 0.937        
cufflinks 0.355        
cufflinks 0.304        
cufflinks 0.659        
cufflinks 0.165       Low
cufflinks 0.792        
cufflinks 0.547        
cufflinks 1.211        

0 Strain