Gene : Bradi5g17027 B. distachyon v3.1
Defline:  (1 of 1) PF10664 - Cyanobacterial and plastid NDH-1 subunit M (NdhM) Genomic Order:  1955
Name:  ? Bradi5g17027 Secondary Identifier:  ? PAC:32808615
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17027 0.5kb upstream 0.5kb upstream 1963 true Bd5: 20404450-20406412 Brachypodium distachyon
Bradi5g17027 0.5kb upstream 0.5kb upstream 500 false Bd5: 20404450-20404949 Brachypodium distachyon
Bradi5g17027 0.5kb downstream 0.5kb downstream 1963 true Bd5: 20404950-20406912 Brachypodium distachyon
Bradi5g17027 0.5kb downstream 0.5kb downstream 500 false Bd5: 20406413-20406912 Brachypodium distachyon
Bradi5g17027 1.0kb upstream 1.0kb upstream 2463 true Bd5: 20403950-20406412 Brachypodium distachyon
Bradi5g17027 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20403950-20404949 Brachypodium distachyon
Bradi5g17027 1.0kb downstream 1.0kb downstream 2463 true Bd5: 20404950-20407412 Brachypodium distachyon
Bradi5g17027 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20406413-20407412 Brachypodium distachyon
Bradi5g17027 2.0kb upstream 2.0kb upstream 3463 true Bd5: 20402950-20406412 Brachypodium distachyon
Bradi5g17027 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20402950-20404949 Brachypodium distachyon
Bradi5g17027 2.0kb downstream 2.0kb downstream 3463 true Bd5: 20404950-20408412 Brachypodium distachyon
Bradi5g17027 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20406413-20408412 Brachypodium distachyon
Bradi5g17027 5.0kb upstream 5.0kb upstream 6463 true Bd5: 20399950-20406412 Brachypodium distachyon
Bradi5g17027 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20399950-20404949 Brachypodium distachyon
Bradi5g17027 5.0kb downstream 5.0kb downstream 6463 true Bd5: 20404950-20411412 Brachypodium distachyon
Bradi5g17027 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20406413-20411412 Brachypodium distachyon
Bradi5g17027 10.0kb upstream 10.0kb upstream 11463 true Bd5: 20394950-20406412 Brachypodium distachyon
Bradi5g17027 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20394950-20404949 Brachypodium distachyon
Bradi5g17027 10.0kb downstream 10.0kb downstream 11463 true Bd5: 20404950-20416412 Brachypodium distachyon
Bradi5g17027 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20406413-20416412 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584080 5269 Grass View MSA
122048776 5273 Angiosperm View MSA
121347175 5274 Embryophyte View MSA
123380502 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.852     High  
cufflinks 33.349     High  
cufflinks 51.002     High  
cufflinks 52.679     High  
cufflinks 22.892     High  
cufflinks 32.3     High  
cufflinks 36.823     High  
cufflinks 38.681     High  
cufflinks 32.631     High  
cufflinks 70.092     High  
cufflinks 57.604     High  
cufflinks 21.705     High  
cufflinks 49.344     High  
cufflinks 61.822     High  
cufflinks 38.502     High  
cufflinks 28.633     High  
cufflinks 48.464     High  
cufflinks 0.296       Low
cufflinks 39.294     High  
cufflinks 15.654     High  
cufflinks 26.023     High  
cufflinks 37.952     High  
cufflinks 43.68     High  
cufflinks 37.503     High  
cufflinks 37.327     High  
cufflinks 59.968     High  
cufflinks 71.72     High  
cufflinks 71.195     High  
cufflinks 62.431     High  
cufflinks 10.785        

0 Strain