Gene : Bradi5g17390 B. distachyon v3.1
Defline:  (1 of 1) 2.4.1.260 - Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase / Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl alpha-6-mannosyltransferase Genomic Order:  2002
Name:  ? Bradi5g17390 Secondary Identifier:  ? PAC:32809879
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17390 0.5kb upstream 0.5kb upstream 7906 true Bd5: 20818938-20826843 Brachypodium distachyon
Bradi5g17390 0.5kb upstream 0.5kb upstream 500 false Bd5: 20826344-20826843 Brachypodium distachyon
Bradi5g17390 0.5kb downstream 0.5kb downstream 7906 true Bd5: 20818438-20826343 Brachypodium distachyon
Bradi5g17390 0.5kb downstream 0.5kb downstream 500 false Bd5: 20818438-20818937 Brachypodium distachyon
Bradi5g17390 1.0kb upstream 1.0kb upstream 8406 true Bd5: 20818938-20827343 Brachypodium distachyon
Bradi5g17390 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20826344-20827343 Brachypodium distachyon
Bradi5g17390 1.0kb downstream 1.0kb downstream 8406 true Bd5: 20817938-20826343 Brachypodium distachyon
Bradi5g17390 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20817938-20818937 Brachypodium distachyon
Bradi5g17390 2.0kb upstream 2.0kb upstream 9406 true Bd5: 20818938-20828343 Brachypodium distachyon
Bradi5g17390 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20826344-20828343 Brachypodium distachyon
Bradi5g17390 2.0kb downstream 2.0kb downstream 9406 true Bd5: 20816938-20826343 Brachypodium distachyon
Bradi5g17390 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20816938-20818937 Brachypodium distachyon
Bradi5g17390 5.0kb upstream 5.0kb upstream 12406 true Bd5: 20818938-20831343 Brachypodium distachyon
Bradi5g17390 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20826344-20831343 Brachypodium distachyon
Bradi5g17390 5.0kb downstream 5.0kb downstream 12406 true Bd5: 20813938-20826343 Brachypodium distachyon
Bradi5g17390 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20813938-20818937 Brachypodium distachyon
Bradi5g17390 10.0kb upstream 10.0kb upstream 17406 true Bd5: 20818938-20836343 Brachypodium distachyon
Bradi5g17390 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20826344-20836343 Brachypodium distachyon
Bradi5g17390 10.0kb downstream 10.0kb downstream 17406 true Bd5: 20808938-20826343 Brachypodium distachyon
Bradi5g17390 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20808938-20818937 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570726 5269 Grass View MSA
122046384 5273 Angiosperm View MSA
121345023 5274 Embryophyte View MSA
123424059 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.259        
cufflinks 0.282        
cufflinks 0.303        
cufflinks 0.312        
cufflinks 0.146       Low
cufflinks 0.278        
cufflinks 0.262        
cufflinks 0.282        
cufflinks 0.3        
cufflinks 0.238        
cufflinks 0.192        
cufflinks 0.22        
cufflinks 0.172        
cufflinks 0.188        
cufflinks 0.208        
cufflinks 0.272        
cufflinks 0.241        
cufflinks 0.435       High
cufflinks 0.377       High
cufflinks 0.121     Low Low
cufflinks 0.422       High
cufflinks 0.317        
cufflinks 0.28        
cufflinks 0.27        
cufflinks 0.288        
cufflinks 0.353        
cufflinks 0.217        
cufflinks 0.316        
cufflinks 0.321        
cufflinks 0.311        

0 Strain