Gene : Bradi5g16917 B. distachyon v3.1
Defline:  (1 of 133) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  1941
Name:  ? Bradi5g16917 Secondary Identifier:  ? PAC:32811371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g16917 0.5kb upstream 0.5kb upstream 4246 true Bd5: 20332204-20336449 Brachypodium distachyon
Bradi5g16917 0.5kb upstream 0.5kb upstream 500 false Bd5: 20335950-20336449 Brachypodium distachyon
Bradi5g16917 0.5kb downstream 0.5kb downstream 4246 true Bd5: 20331704-20335949 Brachypodium distachyon
Bradi5g16917 0.5kb downstream 0.5kb downstream 500 false Bd5: 20331704-20332203 Brachypodium distachyon
Bradi5g16917 1.0kb upstream 1.0kb upstream 4746 true Bd5: 20332204-20336949 Brachypodium distachyon
Bradi5g16917 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20335950-20336949 Brachypodium distachyon
Bradi5g16917 1.0kb downstream 1.0kb downstream 4746 true Bd5: 20331204-20335949 Brachypodium distachyon
Bradi5g16917 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20331204-20332203 Brachypodium distachyon
Bradi5g16917 2.0kb upstream 2.0kb upstream 5746 true Bd5: 20332204-20337949 Brachypodium distachyon
Bradi5g16917 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20335950-20337949 Brachypodium distachyon
Bradi5g16917 2.0kb downstream 2.0kb downstream 5746 true Bd5: 20330204-20335949 Brachypodium distachyon
Bradi5g16917 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20330204-20332203 Brachypodium distachyon
Bradi5g16917 5.0kb upstream 5.0kb upstream 8746 true Bd5: 20332204-20340949 Brachypodium distachyon
Bradi5g16917 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20335950-20340949 Brachypodium distachyon
Bradi5g16917 5.0kb downstream 5.0kb downstream 8746 true Bd5: 20327204-20335949 Brachypodium distachyon
Bradi5g16917 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20327204-20332203 Brachypodium distachyon
Bradi5g16917 10.0kb upstream 10.0kb upstream 13746 true Bd5: 20332204-20345949 Brachypodium distachyon
Bradi5g16917 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20335950-20345949 Brachypodium distachyon
Bradi5g16917 10.0kb downstream 10.0kb downstream 13746 true Bd5: 20322204-20335949 Brachypodium distachyon
Bradi5g16917 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20322204-20332203 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045953 5273 Angiosperm View MSA
124586215 5269 Grass View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156        
cufflinks 0.071     Low  
cufflinks 0.089     Low  
cufflinks 0.036     Low  
cufflinks 0.487       High
cufflinks 0.078     Low  
cufflinks 0.094        
cufflinks 0.075     Low  
cufflinks 0.082     Low  
cufflinks 0.082     Low  
cufflinks 0.003     Low Low
cufflinks 0.163        
cufflinks 0.012     Low Low
cufflinks 0.001     Low Low
cufflinks 0.165        
cufflinks 0.129        
cufflinks 0.115     Low  
cufflinks 0.489       High
cufflinks 0.036     Low  
cufflinks 0.085     Low  
cufflinks 0.007     Low Low
cufflinks 0.093     Low  
cufflinks 0.053     Low  
cufflinks 0.068     Low  
cufflinks 0.065     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.105     Low  
cufflinks 0.27       High

0 Strain