Gene : Bradi5g16970 B. distachyon v3.1
Defline:  (1 of 1) PTHR22904:SF371 - HSP70-HSP90 ORGANIZING PROTEIN 1-RELATED Genomic Order:  1947
Name:  ? Bradi5g16970 Secondary Identifier:  ? PAC:32808334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g16970 0.5kb upstream 0.5kb upstream 3993 true Bd5: 20364122-20368114 Brachypodium distachyon
Bradi5g16970 0.5kb upstream 0.5kb upstream 500 false Bd5: 20364122-20364621 Brachypodium distachyon
Bradi5g16970 0.5kb downstream 0.5kb downstream 3993 true Bd5: 20364622-20368614 Brachypodium distachyon
Bradi5g16970 0.5kb downstream 0.5kb downstream 500 false Bd5: 20368115-20368614 Brachypodium distachyon
Bradi5g16970 1.0kb upstream 1.0kb upstream 4493 true Bd5: 20363622-20368114 Brachypodium distachyon
Bradi5g16970 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20363622-20364621 Brachypodium distachyon
Bradi5g16970 1.0kb downstream 1.0kb downstream 4493 true Bd5: 20364622-20369114 Brachypodium distachyon
Bradi5g16970 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20368115-20369114 Brachypodium distachyon
Bradi5g16970 2.0kb upstream 2.0kb upstream 5493 true Bd5: 20362622-20368114 Brachypodium distachyon
Bradi5g16970 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20362622-20364621 Brachypodium distachyon
Bradi5g16970 2.0kb downstream 2.0kb downstream 5493 true Bd5: 20364622-20370114 Brachypodium distachyon
Bradi5g16970 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20368115-20370114 Brachypodium distachyon
Bradi5g16970 5.0kb upstream 5.0kb upstream 8493 true Bd5: 20359622-20368114 Brachypodium distachyon
Bradi5g16970 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20359622-20364621 Brachypodium distachyon
Bradi5g16970 5.0kb downstream 5.0kb downstream 8493 true Bd5: 20364622-20373114 Brachypodium distachyon
Bradi5g16970 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20368115-20373114 Brachypodium distachyon
Bradi5g16970 10.0kb upstream 10.0kb upstream 13493 true Bd5: 20354622-20368114 Brachypodium distachyon
Bradi5g16970 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20354622-20364621 Brachypodium distachyon
Bradi5g16970 10.0kb downstream 10.0kb downstream 13493 true Bd5: 20364622-20378114 Brachypodium distachyon
Bradi5g16970 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20368115-20378114 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582655 5269 Grass View MSA
122044378 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121343980 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.201        
cufflinks 1.396        
cufflinks 1.466        
cufflinks 2.001        
cufflinks 4.373        
cufflinks 1.928        
cufflinks 1.199        
cufflinks 8.314       High
cufflinks 3.072        
cufflinks 1.62        
cufflinks 1.349        
cufflinks 21.67     High High
cufflinks 0.663       Low
cufflinks 1.046        
cufflinks 3.875        
cufflinks 1.283        
cufflinks 2.943        
cufflinks 4.824        
cufflinks 1.406        
cufflinks 2.556        
cufflinks 3.785        
cufflinks 2.291        
cufflinks 7.9       High
cufflinks 2.912        
cufflinks 2.019        
cufflinks 1.095        
cufflinks 0.29       Low
cufflinks 1.16        
cufflinks 1.568        
cufflinks 2.237        

0 Strain