Gene : Bradi1g48426 B. distachyon v3.1
Defline:  (1 of 1) PTHR10782:SF4 - SUPPRESSOR OF VARIEGATION 2-10, ISOFORM I Genomic Order:  6054
Name:  ? Bradi1g48426 Secondary Identifier:  ? PAC:32798335
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g48426 0.5kb upstream 0.5kb upstream 8312 true Bd1: 47202173-47210484 Brachypodium distachyon
Bradi1g48426 0.5kb upstream 0.5kb upstream 500 false Bd1: 47202173-47202672 Brachypodium distachyon
Bradi1g48426 0.5kb downstream 0.5kb downstream 8312 true Bd1: 47202673-47210984 Brachypodium distachyon
Bradi1g48426 0.5kb downstream 0.5kb downstream 500 false Bd1: 47210485-47210984 Brachypodium distachyon
Bradi1g48426 1.0kb upstream 1.0kb upstream 8812 true Bd1: 47201673-47210484 Brachypodium distachyon
Bradi1g48426 1.0kb upstream 1.0kb upstream 1000 false Bd1: 47201673-47202672 Brachypodium distachyon
Bradi1g48426 1.0kb downstream 1.0kb downstream 8812 true Bd1: 47202673-47211484 Brachypodium distachyon
Bradi1g48426 1.0kb downstream 1.0kb downstream 1000 false Bd1: 47210485-47211484 Brachypodium distachyon
Bradi1g48426 2.0kb upstream 2.0kb upstream 9812 true Bd1: 47200673-47210484 Brachypodium distachyon
Bradi1g48426 2.0kb upstream 2.0kb upstream 2000 false Bd1: 47200673-47202672 Brachypodium distachyon
Bradi1g48426 2.0kb downstream 2.0kb downstream 9812 true Bd1: 47202673-47212484 Brachypodium distachyon
Bradi1g48426 2.0kb downstream 2.0kb downstream 2000 false Bd1: 47210485-47212484 Brachypodium distachyon
Bradi1g48426 5.0kb upstream 5.0kb upstream 12812 true Bd1: 47197673-47210484 Brachypodium distachyon
Bradi1g48426 5.0kb upstream 5.0kb upstream 5000 false Bd1: 47197673-47202672 Brachypodium distachyon
Bradi1g48426 5.0kb downstream 5.0kb downstream 12812 true Bd1: 47202673-47215484 Brachypodium distachyon
Bradi1g48426 5.0kb downstream 5.0kb downstream 5000 false Bd1: 47210485-47215484 Brachypodium distachyon
Bradi1g48426 10.0kb upstream 10.0kb upstream 17812 true Bd1: 47192673-47210484 Brachypodium distachyon
Bradi1g48426 10.0kb upstream 10.0kb upstream 10000 false Bd1: 47192673-47202672 Brachypodium distachyon
Bradi1g48426 10.0kb downstream 10.0kb downstream 17812 true Bd1: 47202673-47220484 Brachypodium distachyon
Bradi1g48426 10.0kb downstream 10.0kb downstream 10000 false Bd1: 47210485-47220484 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571498 5269 Grass View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.4        
cufflinks 8.521        
cufflinks 10.768     High High
cufflinks 6.692        
cufflinks 3.598       Low
cufflinks 7.114        
cufflinks 7.633        
cufflinks 7.693        
cufflinks 7.198        
cufflinks 6.554        
cufflinks 7.499        
cufflinks 6.549        
cufflinks 6.359        
cufflinks 4.999        
cufflinks 4.353        
cufflinks 8.072        
cufflinks 3.919       Low
cufflinks 13.426     High High
cufflinks 7.763        
cufflinks 4.374        
cufflinks 7.695        
cufflinks 11.521     High High
cufflinks 7.0        
cufflinks 6.474        
cufflinks 5.971        
cufflinks 9.245        
cufflinks 7.353        
cufflinks 9.796        
cufflinks 9.719        
cufflinks 8.044        

0 Strain