Gene : Bradi5g17087 B. distachyon v3.1
Defline:  (1 of 1) PTHR31673:SF5 - COBRA-LIKE PROTEIN 6 Genomic Order:  1963
Name:  ? Bradi5g17087 Secondary Identifier:  ? PAC:32809407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17087 0.5kb upstream 0.5kb upstream 3228 true Bd5: 20465164-20468391 Brachypodium distachyon
Bradi5g17087 0.5kb upstream 0.5kb upstream 500 false Bd5: 20465164-20465663 Brachypodium distachyon
Bradi5g17087 0.5kb downstream 0.5kb downstream 3228 true Bd5: 20465664-20468891 Brachypodium distachyon
Bradi5g17087 0.5kb downstream 0.5kb downstream 500 false Bd5: 20468392-20468891 Brachypodium distachyon
Bradi5g17087 1.0kb upstream 1.0kb upstream 3728 true Bd5: 20464664-20468391 Brachypodium distachyon
Bradi5g17087 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20464664-20465663 Brachypodium distachyon
Bradi5g17087 1.0kb downstream 1.0kb downstream 3728 true Bd5: 20465664-20469391 Brachypodium distachyon
Bradi5g17087 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20468392-20469391 Brachypodium distachyon
Bradi5g17087 2.0kb upstream 2.0kb upstream 4728 true Bd5: 20463664-20468391 Brachypodium distachyon
Bradi5g17087 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20463664-20465663 Brachypodium distachyon
Bradi5g17087 2.0kb downstream 2.0kb downstream 4728 true Bd5: 20465664-20470391 Brachypodium distachyon
Bradi5g17087 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20468392-20470391 Brachypodium distachyon
Bradi5g17087 5.0kb upstream 5.0kb upstream 7728 true Bd5: 20460664-20468391 Brachypodium distachyon
Bradi5g17087 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20460664-20465663 Brachypodium distachyon
Bradi5g17087 5.0kb downstream 5.0kb downstream 7728 true Bd5: 20465664-20473391 Brachypodium distachyon
Bradi5g17087 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20468392-20473391 Brachypodium distachyon
Bradi5g17087 10.0kb upstream 10.0kb upstream 12728 true Bd5: 20455664-20468391 Brachypodium distachyon
Bradi5g17087 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20455664-20465663 Brachypodium distachyon
Bradi5g17087 10.0kb downstream 10.0kb downstream 12728 true Bd5: 20465664-20478391 Brachypodium distachyon
Bradi5g17087 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20468392-20478391 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026737 5273 Angiosperm View MSA
124580922 5269 Grass View MSA
121296516 5274 Embryophyte View MSA
123334664 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.088     Low High
cufflinks 0.014     Low  
cufflinks 0.005     Low Low
cufflinks 0.005     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.017     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08     Low High
cufflinks 0.024     Low  
cufflinks 0.191       High
cufflinks 0.018     Low  
cufflinks 0.023     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.025     Low  
cufflinks 0.018     Low  

0 Strain