Gene : Bradi1g48747 B. distachyon v3.1
Defline:  (1 of 1) PTHR23155//PTHR23155:SF631 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  6098
Name:  ? Bradi1g48747 Secondary Identifier:  ? PAC:32798430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g48747 0.5kb upstream 0.5kb upstream 5747 true Bd1: 47585576-47591322 Brachypodium distachyon
Bradi1g48747 0.5kb upstream 0.5kb upstream 500 false Bd1: 47585576-47586075 Brachypodium distachyon
Bradi1g48747 0.5kb downstream 0.5kb downstream 5747 true Bd1: 47586076-47591822 Brachypodium distachyon
Bradi1g48747 0.5kb downstream 0.5kb downstream 500 false Bd1: 47591323-47591822 Brachypodium distachyon
Bradi1g48747 1.0kb upstream 1.0kb upstream 6247 true Bd1: 47585076-47591322 Brachypodium distachyon
Bradi1g48747 1.0kb upstream 1.0kb upstream 1000 false Bd1: 47585076-47586075 Brachypodium distachyon
Bradi1g48747 1.0kb downstream 1.0kb downstream 6247 true Bd1: 47586076-47592322 Brachypodium distachyon
Bradi1g48747 1.0kb downstream 1.0kb downstream 1000 false Bd1: 47591323-47592322 Brachypodium distachyon
Bradi1g48747 2.0kb upstream 2.0kb upstream 7247 true Bd1: 47584076-47591322 Brachypodium distachyon
Bradi1g48747 2.0kb upstream 2.0kb upstream 2000 false Bd1: 47584076-47586075 Brachypodium distachyon
Bradi1g48747 2.0kb downstream 2.0kb downstream 7247 true Bd1: 47586076-47593322 Brachypodium distachyon
Bradi1g48747 2.0kb downstream 2.0kb downstream 2000 false Bd1: 47591323-47593322 Brachypodium distachyon
Bradi1g48747 5.0kb upstream 5.0kb upstream 10247 true Bd1: 47581076-47591322 Brachypodium distachyon
Bradi1g48747 5.0kb upstream 5.0kb upstream 5000 false Bd1: 47581076-47586075 Brachypodium distachyon
Bradi1g48747 5.0kb downstream 5.0kb downstream 10247 true Bd1: 47586076-47596322 Brachypodium distachyon
Bradi1g48747 5.0kb downstream 5.0kb downstream 5000 false Bd1: 47591323-47596322 Brachypodium distachyon
Bradi1g48747 10.0kb upstream 10.0kb upstream 15247 true Bd1: 47576076-47591322 Brachypodium distachyon
Bradi1g48747 10.0kb upstream 10.0kb upstream 10000 false Bd1: 47576076-47586075 Brachypodium distachyon
Bradi1g48747 10.0kb downstream 10.0kb downstream 15247 true Bd1: 47586076-47601322 Brachypodium distachyon
Bradi1g48747 10.0kb downstream 10.0kb downstream 10000 false Bd1: 47591323-47601322 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589979 5269 Grass View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.634        
cufflinks 1.919       High
cufflinks 1.58        
cufflinks 1.322        
cufflinks 0.495       Low
cufflinks 1.435        
cufflinks 1.466        
cufflinks 1.07        
cufflinks 1.437        
cufflinks 0.593        
cufflinks 0.968        
cufflinks 1.071        
cufflinks 0.637        
cufflinks 0.613        
cufflinks 0.47       Low
cufflinks 1.294        
cufflinks 0.564       Low
cufflinks 1.745       High
cufflinks 0.799        
cufflinks 0.721        
cufflinks 1.043        
cufflinks 0.998        
cufflinks 1.098        
cufflinks 0.999        
cufflinks 1.267        
cufflinks 1.121        
cufflinks 0.957        
cufflinks 1.047        
cufflinks 1.158        
cufflinks 1.685        

0 Strain