Gene : Bradi5g16672 B. distachyon v3.1
Defline:  (1 of 2) PTHR10641//PTHR10641:SF629 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  1906
Name:  ? Bradi5g16672 Secondary Identifier:  ? PAC:32810944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g16672 0.5kb upstream 0.5kb upstream 3187 true Bd5: 20129191-20132377 Brachypodium distachyon
Bradi5g16672 0.5kb upstream 0.5kb upstream 500 false Bd5: 20129191-20129690 Brachypodium distachyon
Bradi5g16672 0.5kb downstream 0.5kb downstream 3187 true Bd5: 20129691-20132877 Brachypodium distachyon
Bradi5g16672 0.5kb downstream 0.5kb downstream 500 false Bd5: 20132378-20132877 Brachypodium distachyon
Bradi5g16672 1.0kb upstream 1.0kb upstream 3687 true Bd5: 20128691-20132377 Brachypodium distachyon
Bradi5g16672 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20128691-20129690 Brachypodium distachyon
Bradi5g16672 1.0kb downstream 1.0kb downstream 3687 true Bd5: 20129691-20133377 Brachypodium distachyon
Bradi5g16672 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20132378-20133377 Brachypodium distachyon
Bradi5g16672 2.0kb upstream 2.0kb upstream 4687 true Bd5: 20127691-20132377 Brachypodium distachyon
Bradi5g16672 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20127691-20129690 Brachypodium distachyon
Bradi5g16672 2.0kb downstream 2.0kb downstream 4687 true Bd5: 20129691-20134377 Brachypodium distachyon
Bradi5g16672 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20132378-20134377 Brachypodium distachyon
Bradi5g16672 5.0kb upstream 5.0kb upstream 7687 true Bd5: 20124691-20132377 Brachypodium distachyon
Bradi5g16672 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20124691-20129690 Brachypodium distachyon
Bradi5g16672 5.0kb downstream 5.0kb downstream 7687 true Bd5: 20129691-20137377 Brachypodium distachyon
Bradi5g16672 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20132378-20137377 Brachypodium distachyon
Bradi5g16672 10.0kb upstream 10.0kb upstream 12687 true Bd5: 20119691-20132377 Brachypodium distachyon
Bradi5g16672 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20119691-20129690 Brachypodium distachyon
Bradi5g16672 10.0kb downstream 10.0kb downstream 12687 true Bd5: 20129691-20142377 Brachypodium distachyon
Bradi5g16672 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20132378-20142377 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583433 5269 Grass View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.758        
cufflinks 0.533        
cufflinks 0.538        
cufflinks 0.768        
cufflinks 0.701        
cufflinks 0.334        
cufflinks 0.567        
cufflinks 0.319        
cufflinks 0.347        
cufflinks 0.785        
cufflinks 0.151       Low
cufflinks 0.328        
cufflinks 0.125       Low
cufflinks 0.132       Low
cufflinks 0.278        
cufflinks 0.324        
cufflinks 1.17       High
cufflinks 2.691       High
cufflinks 1.633       High
cufflinks 0.363        
cufflinks 0.467        
cufflinks 0.285        
cufflinks 0.296        
cufflinks 0.437        
cufflinks 0.556        
cufflinks 0.754        
cufflinks 0.138       Low
cufflinks 0.762        
cufflinks 0.651        
cufflinks 0.764        

0 Strain