Gene : Bradi1g49130 B. distachyon v3.1
Defline:  (1 of 1) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  6152
Name:  ? Bradi1g49130 Secondary Identifier:  ? PAC:32800257
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6730 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g49130 0.5kb upstream 0.5kb upstream 7004 true Bd1: 48025369-48032372 Brachypodium distachyon
Bradi1g49130 0.5kb upstream 0.5kb upstream 500 false Bd1: 48025369-48025868 Brachypodium distachyon
Bradi1g49130 0.5kb downstream 0.5kb downstream 7004 true Bd1: 48025869-48032872 Brachypodium distachyon
Bradi1g49130 0.5kb downstream 0.5kb downstream 500 false Bd1: 48032373-48032872 Brachypodium distachyon
Bradi1g49130 1.0kb upstream 1.0kb upstream 7504 true Bd1: 48024869-48032372 Brachypodium distachyon
Bradi1g49130 1.0kb upstream 1.0kb upstream 1000 false Bd1: 48024869-48025868 Brachypodium distachyon
Bradi1g49130 1.0kb downstream 1.0kb downstream 7504 true Bd1: 48025869-48033372 Brachypodium distachyon
Bradi1g49130 1.0kb downstream 1.0kb downstream 1000 false Bd1: 48032373-48033372 Brachypodium distachyon
Bradi1g49130 2.0kb upstream 2.0kb upstream 8504 true Bd1: 48023869-48032372 Brachypodium distachyon
Bradi1g49130 2.0kb upstream 2.0kb upstream 2000 false Bd1: 48023869-48025868 Brachypodium distachyon
Bradi1g49130 2.0kb downstream 2.0kb downstream 8504 true Bd1: 48025869-48034372 Brachypodium distachyon
Bradi1g49130 2.0kb downstream 2.0kb downstream 2000 false Bd1: 48032373-48034372 Brachypodium distachyon
Bradi1g49130 5.0kb upstream 5.0kb upstream 11504 true Bd1: 48020869-48032372 Brachypodium distachyon
Bradi1g49130 5.0kb upstream 5.0kb upstream 5000 false Bd1: 48020869-48025868 Brachypodium distachyon
Bradi1g49130 5.0kb downstream 5.0kb downstream 11504 true Bd1: 48025869-48037372 Brachypodium distachyon
Bradi1g49130 5.0kb downstream 5.0kb downstream 5000 false Bd1: 48032373-48037372 Brachypodium distachyon
Bradi1g49130 10.0kb upstream 10.0kb upstream 16504 true Bd1: 48015869-48032372 Brachypodium distachyon
Bradi1g49130 10.0kb upstream 10.0kb upstream 10000 false Bd1: 48015869-48025868 Brachypodium distachyon
Bradi1g49130 10.0kb downstream 10.0kb downstream 16504 true Bd1: 48025869-48042372 Brachypodium distachyon
Bradi1g49130 10.0kb downstream 10.0kb downstream 10000 false Bd1: 48032373-48042372 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
124584255 5269 Grass View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.982       Low
cufflinks 2.777       Low
cufflinks 4.456        
cufflinks 3.153        
cufflinks 5.479        
cufflinks 2.686       Low
cufflinks 3.159        
cufflinks 2.52       Low
cufflinks 2.794       Low
cufflinks 8.978       High
cufflinks 9.347     High High
cufflinks 3.081        
cufflinks 4.88        
cufflinks 5.91        
cufflinks 4.171        
cufflinks 3.905        
cufflinks 5.501        
cufflinks 4.795        
cufflinks 7.035        
cufflinks 11.021       High
cufflinks 3.394        
cufflinks 5.909        
cufflinks 2.709       Low
cufflinks 2.647       Low
cufflinks 3.111        
cufflinks 6.672        
cufflinks 4.291        
cufflinks 6.309        
cufflinks 4.722        
cufflinks 2.62       Low

0 Strain