Gene : Bradi1g49300 B. distachyon v3.1
Defline:  (1 of 1) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  6180
Name:  ? Bradi1g49300 Secondary Identifier:  ? PAC:32805631
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ANAEROFRUCAT-PWY Brachypodium distachyon pathologic  
Bdistachyon ANAGLYCOLYSIS-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-1042 Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g49300 0.5kb upstream 0.5kb upstream 5300 true Bd1: 48257154-48262453 Brachypodium distachyon
Bradi1g49300 0.5kb upstream 0.5kb upstream 500 false Bd1: 48257154-48257653 Brachypodium distachyon
Bradi1g49300 0.5kb downstream 0.5kb downstream 5300 true Bd1: 48257654-48262953 Brachypodium distachyon
Bradi1g49300 0.5kb downstream 0.5kb downstream 500 false Bd1: 48262454-48262953 Brachypodium distachyon
Bradi1g49300 1.0kb upstream 1.0kb upstream 5800 true Bd1: 48256654-48262453 Brachypodium distachyon
Bradi1g49300 1.0kb upstream 1.0kb upstream 1000 false Bd1: 48256654-48257653 Brachypodium distachyon
Bradi1g49300 1.0kb downstream 1.0kb downstream 5800 true Bd1: 48257654-48263453 Brachypodium distachyon
Bradi1g49300 1.0kb downstream 1.0kb downstream 1000 false Bd1: 48262454-48263453 Brachypodium distachyon
Bradi1g49300 2.0kb upstream 2.0kb upstream 6800 true Bd1: 48255654-48262453 Brachypodium distachyon
Bradi1g49300 2.0kb upstream 2.0kb upstream 2000 false Bd1: 48255654-48257653 Brachypodium distachyon
Bradi1g49300 2.0kb downstream 2.0kb downstream 6800 true Bd1: 48257654-48264453 Brachypodium distachyon
Bradi1g49300 2.0kb downstream 2.0kb downstream 2000 false Bd1: 48262454-48264453 Brachypodium distachyon
Bradi1g49300 5.0kb upstream 5.0kb upstream 9800 true Bd1: 48252654-48262453 Brachypodium distachyon
Bradi1g49300 5.0kb upstream 5.0kb upstream 5000 false Bd1: 48252654-48257653 Brachypodium distachyon
Bradi1g49300 5.0kb downstream 5.0kb downstream 9800 true Bd1: 48257654-48267453 Brachypodium distachyon
Bradi1g49300 5.0kb downstream 5.0kb downstream 5000 false Bd1: 48262454-48267453 Brachypodium distachyon
Bradi1g49300 10.0kb upstream 10.0kb upstream 14800 true Bd1: 48247654-48262453 Brachypodium distachyon
Bradi1g49300 10.0kb upstream 10.0kb upstream 10000 false Bd1: 48247654-48257653 Brachypodium distachyon
Bradi1g49300 10.0kb downstream 10.0kb downstream 14800 true Bd1: 48257654-48272453 Brachypodium distachyon
Bradi1g49300 10.0kb downstream 10.0kb downstream 10000 false Bd1: 48262454-48272453 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
124574509 5269 Grass View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.943     High  
cufflinks 11.411     High  
cufflinks 10.963     High  
cufflinks 11.143     High  
cufflinks 13.158     High  
cufflinks 18.862     High  
cufflinks 14.618     High  
cufflinks 21.148     High  
cufflinks 23.904     High High
cufflinks 17.865     High  
cufflinks 30.874     High High
cufflinks 21.395     High  
cufflinks 31.093     High High
cufflinks 33.208     High High
cufflinks 15.948     High  
cufflinks 16.224     High  
cufflinks 21.781     High  
cufflinks 6.347       Low
cufflinks 20.606     High  
cufflinks 8.724       Low
cufflinks 9.92        
cufflinks 17.275     High  
cufflinks 21.107     High  
cufflinks 23.481     High High
cufflinks 17.731     High  
cufflinks 12.064     High  
cufflinks 38.631     High High
cufflinks 13.182     High  
cufflinks 15.163     High  
cufflinks 9.263       Low

0 Strain