Gene : Bradi5g16520 B. distachyon v3.1
Defline:  GTPase activity (Blast2GO) Genomic Order:  1885
Name:  ? Bradi5g16520 Secondary Identifier:  ? PAC:32811896
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g16520 0.5kb upstream 0.5kb upstream 5530 true Bd5: 20031195-20036724 Brachypodium distachyon
Bradi5g16520 0.5kb upstream 0.5kb upstream 500 false Bd5: 20036225-20036724 Brachypodium distachyon
Bradi5g16520 0.5kb downstream 0.5kb downstream 5530 true Bd5: 20030695-20036224 Brachypodium distachyon
Bradi5g16520 0.5kb downstream 0.5kb downstream 500 false Bd5: 20030695-20031194 Brachypodium distachyon
Bradi5g16520 1.0kb upstream 1.0kb upstream 6030 true Bd5: 20031195-20037224 Brachypodium distachyon
Bradi5g16520 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20036225-20037224 Brachypodium distachyon
Bradi5g16520 1.0kb downstream 1.0kb downstream 6030 true Bd5: 20030195-20036224 Brachypodium distachyon
Bradi5g16520 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20030195-20031194 Brachypodium distachyon
Bradi5g16520 2.0kb upstream 2.0kb upstream 7030 true Bd5: 20031195-20038224 Brachypodium distachyon
Bradi5g16520 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20036225-20038224 Brachypodium distachyon
Bradi5g16520 2.0kb downstream 2.0kb downstream 7030 true Bd5: 20029195-20036224 Brachypodium distachyon
Bradi5g16520 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20029195-20031194 Brachypodium distachyon
Bradi5g16520 5.0kb upstream 5.0kb upstream 10030 true Bd5: 20031195-20041224 Brachypodium distachyon
Bradi5g16520 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20036225-20041224 Brachypodium distachyon
Bradi5g16520 5.0kb downstream 5.0kb downstream 10030 true Bd5: 20026195-20036224 Brachypodium distachyon
Bradi5g16520 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20026195-20031194 Brachypodium distachyon
Bradi5g16520 10.0kb upstream 10.0kb upstream 15030 true Bd5: 20031195-20046224 Brachypodium distachyon
Bradi5g16520 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20036225-20046224 Brachypodium distachyon
Bradi5g16520 10.0kb downstream 10.0kb downstream 15030 true Bd5: 20021195-20036224 Brachypodium distachyon
Bradi5g16520 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20021195-20031194 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041445 5273 Angiosperm View MSA
124580447 5269 Grass View MSA
121345891 5274 Embryophyte View MSA
123428048 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.329        
cufflinks 0.962        
cufflinks 1.088        
cufflinks 0.989        
cufflinks 1.185        
cufflinks 0.913        
cufflinks 0.905        
cufflinks 0.923        
cufflinks 0.965        
cufflinks 1.179        
cufflinks 1.072        
cufflinks 1.136        
cufflinks 0.691       Low
cufflinks 0.846       Low
cufflinks 1.388        
cufflinks 1.028        
cufflinks 1.316        
cufflinks 1.313        
cufflinks 2.422       High
cufflinks 1.496       High
cufflinks 1.154        
cufflinks 1.284        
cufflinks 0.922        
cufflinks 0.879        
cufflinks 0.972        
cufflinks 1.218        
cufflinks 0.966        
cufflinks 1.196        
cufflinks 1.025        
cufflinks 1.469        

0 Strain