Gene : Bradi1g49657 B. distachyon v3.1
Defline:  (1 of 1) PTHR14927:SF0 - NUCLEOLAR PROTEIN 10 Genomic Order:  6226
Name:  ? Bradi1g49657 Secondary Identifier:  ? PAC:32802130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g49657 0.5kb upstream 0.5kb upstream 7821 true Bd1: 48514429-48522249 Brachypodium distachyon
Bradi1g49657 0.5kb upstream 0.5kb upstream 500 false Bd1: 48514429-48514928 Brachypodium distachyon
Bradi1g49657 0.5kb downstream 0.5kb downstream 7821 true Bd1: 48514929-48522749 Brachypodium distachyon
Bradi1g49657 0.5kb downstream 0.5kb downstream 500 false Bd1: 48522250-48522749 Brachypodium distachyon
Bradi1g49657 1.0kb upstream 1.0kb upstream 8321 true Bd1: 48513929-48522249 Brachypodium distachyon
Bradi1g49657 1.0kb upstream 1.0kb upstream 1000 false Bd1: 48513929-48514928 Brachypodium distachyon
Bradi1g49657 1.0kb downstream 1.0kb downstream 8321 true Bd1: 48514929-48523249 Brachypodium distachyon
Bradi1g49657 1.0kb downstream 1.0kb downstream 1000 false Bd1: 48522250-48523249 Brachypodium distachyon
Bradi1g49657 2.0kb upstream 2.0kb upstream 9321 true Bd1: 48512929-48522249 Brachypodium distachyon
Bradi1g49657 2.0kb upstream 2.0kb upstream 2000 false Bd1: 48512929-48514928 Brachypodium distachyon
Bradi1g49657 2.0kb downstream 2.0kb downstream 9321 true Bd1: 48514929-48524249 Brachypodium distachyon
Bradi1g49657 2.0kb downstream 2.0kb downstream 2000 false Bd1: 48522250-48524249 Brachypodium distachyon
Bradi1g49657 5.0kb upstream 5.0kb upstream 12321 true Bd1: 48509929-48522249 Brachypodium distachyon
Bradi1g49657 5.0kb upstream 5.0kb upstream 5000 false Bd1: 48509929-48514928 Brachypodium distachyon
Bradi1g49657 5.0kb downstream 5.0kb downstream 12321 true Bd1: 48514929-48527249 Brachypodium distachyon
Bradi1g49657 5.0kb downstream 5.0kb downstream 5000 false Bd1: 48522250-48527249 Brachypodium distachyon
Bradi1g49657 10.0kb upstream 10.0kb upstream 17321 true Bd1: 48504929-48522249 Brachypodium distachyon
Bradi1g49657 10.0kb upstream 10.0kb upstream 10000 false Bd1: 48504929-48514928 Brachypodium distachyon
Bradi1g49657 10.0kb downstream 10.0kb downstream 17321 true Bd1: 48514929-48532249 Brachypodium distachyon
Bradi1g49657 10.0kb downstream 10.0kb downstream 10000 false Bd1: 48522250-48532249 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581285 5269 Grass View MSA
122042207 5273 Angiosperm View MSA
121344508 5274 Embryophyte View MSA
123424204 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.573        
cufflinks 3.294        
cufflinks 3.524        
cufflinks 2.507        
cufflinks 0.957        
cufflinks 2.889        
cufflinks 2.611        
cufflinks 2.062        
cufflinks 2.528        
cufflinks 1.332        
cufflinks 1.788        
cufflinks 2.609        
cufflinks 1.093        
cufflinks 1.073        
cufflinks 1.214        
cufflinks 2.544        
cufflinks 1.111        
cufflinks 6.148       High
cufflinks 1.453        
cufflinks 0.32       Low
cufflinks 1.586        
cufflinks 2.6        
cufflinks 2.426        
cufflinks 2.21        
cufflinks 2.724        
cufflinks 2.203        
cufflinks 1.621        
cufflinks 1.988        
cufflinks 2.055        
cufflinks 2.679        

0 Strain