Gene : Bradi1g49670 B. distachyon v3.1
Defline:  (1 of 1) PTHR21183 - RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED Genomic Order:  6228
Name:  ? Bradi1g49670 Secondary Identifier:  ? PAC:32797685
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g49670 0.5kb upstream 0.5kb upstream 3111 true Bd1: 48524170-48527280 Brachypodium distachyon
Bradi1g49670 0.5kb upstream 0.5kb upstream 500 false Bd1: 48524170-48524669 Brachypodium distachyon
Bradi1g49670 0.5kb downstream 0.5kb downstream 3111 true Bd1: 48524670-48527780 Brachypodium distachyon
Bradi1g49670 0.5kb downstream 0.5kb downstream 500 false Bd1: 48527281-48527780 Brachypodium distachyon
Bradi1g49670 1.0kb upstream 1.0kb upstream 3611 true Bd1: 48523670-48527280 Brachypodium distachyon
Bradi1g49670 1.0kb upstream 1.0kb upstream 1000 false Bd1: 48523670-48524669 Brachypodium distachyon
Bradi1g49670 1.0kb downstream 1.0kb downstream 3611 true Bd1: 48524670-48528280 Brachypodium distachyon
Bradi1g49670 1.0kb downstream 1.0kb downstream 1000 false Bd1: 48527281-48528280 Brachypodium distachyon
Bradi1g49670 2.0kb upstream 2.0kb upstream 4611 true Bd1: 48522670-48527280 Brachypodium distachyon
Bradi1g49670 2.0kb upstream 2.0kb upstream 2000 false Bd1: 48522670-48524669 Brachypodium distachyon
Bradi1g49670 2.0kb downstream 2.0kb downstream 4611 true Bd1: 48524670-48529280 Brachypodium distachyon
Bradi1g49670 2.0kb downstream 2.0kb downstream 2000 false Bd1: 48527281-48529280 Brachypodium distachyon
Bradi1g49670 5.0kb upstream 5.0kb upstream 7611 true Bd1: 48519670-48527280 Brachypodium distachyon
Bradi1g49670 5.0kb upstream 5.0kb upstream 5000 false Bd1: 48519670-48524669 Brachypodium distachyon
Bradi1g49670 5.0kb downstream 5.0kb downstream 7611 true Bd1: 48524670-48532280 Brachypodium distachyon
Bradi1g49670 5.0kb downstream 5.0kb downstream 5000 false Bd1: 48527281-48532280 Brachypodium distachyon
Bradi1g49670 10.0kb upstream 10.0kb upstream 12611 true Bd1: 48514670-48527280 Brachypodium distachyon
Bradi1g49670 10.0kb upstream 10.0kb upstream 10000 false Bd1: 48514670-48524669 Brachypodium distachyon
Bradi1g49670 10.0kb downstream 10.0kb downstream 12611 true Bd1: 48524670-48537280 Brachypodium distachyon
Bradi1g49670 10.0kb downstream 10.0kb downstream 10000 false Bd1: 48527281-48537280 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572551 5269 Grass View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.44        
cufflinks 8.729        
cufflinks 7.272        
cufflinks 7.143        
cufflinks 4.618        
cufflinks 6.346        
cufflinks 9.077        
cufflinks 5.332        
cufflinks 5.501        
cufflinks 4.69        
cufflinks 2.16       Low
cufflinks 3.876        
cufflinks 1.312       Low
cufflinks 1.467       Low
cufflinks 1.646       Low
cufflinks 6.448        
cufflinks 9.346        
cufflinks 13.445     High High
cufflinks 9.939       High
cufflinks 0.645       Low
cufflinks 9.841       High
cufflinks 5.023        
cufflinks 5.175        
cufflinks 4.736        
cufflinks 7.337        
cufflinks 6.379        
cufflinks 1.952       Low
cufflinks 5.36        
cufflinks 5.202        
cufflinks 6.836        

0 Strain