Gene : Bradi1g45800 B. distachyon v3.1
Defline:  (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Genomic Order:  5667
Name:  ? Bradi1g45800 Secondary Identifier:  ? PAC:32806821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g45800 0.5kb upstream 0.5kb upstream 7136 true Bd1: 44216475-44223610 Brachypodium distachyon
Bradi1g45800 0.5kb upstream 0.5kb upstream 500 false Bd1: 44223111-44223610 Brachypodium distachyon
Bradi1g45800 0.5kb downstream 0.5kb downstream 7136 true Bd1: 44215975-44223110 Brachypodium distachyon
Bradi1g45800 0.5kb downstream 0.5kb downstream 500 false Bd1: 44215975-44216474 Brachypodium distachyon
Bradi1g45800 1.0kb upstream 1.0kb upstream 7636 true Bd1: 44216475-44224110 Brachypodium distachyon
Bradi1g45800 1.0kb upstream 1.0kb upstream 1000 false Bd1: 44223111-44224110 Brachypodium distachyon
Bradi1g45800 1.0kb downstream 1.0kb downstream 7636 true Bd1: 44215475-44223110 Brachypodium distachyon
Bradi1g45800 1.0kb downstream 1.0kb downstream 1000 false Bd1: 44215475-44216474 Brachypodium distachyon
Bradi1g45800 2.0kb upstream 2.0kb upstream 8636 true Bd1: 44216475-44225110 Brachypodium distachyon
Bradi1g45800 2.0kb upstream 2.0kb upstream 2000 false Bd1: 44223111-44225110 Brachypodium distachyon
Bradi1g45800 2.0kb downstream 2.0kb downstream 8636 true Bd1: 44214475-44223110 Brachypodium distachyon
Bradi1g45800 2.0kb downstream 2.0kb downstream 2000 false Bd1: 44214475-44216474 Brachypodium distachyon
Bradi1g45800 5.0kb upstream 5.0kb upstream 11636 true Bd1: 44216475-44228110 Brachypodium distachyon
Bradi1g45800 5.0kb upstream 5.0kb upstream 5000 false Bd1: 44223111-44228110 Brachypodium distachyon
Bradi1g45800 5.0kb downstream 5.0kb downstream 11636 true Bd1: 44211475-44223110 Brachypodium distachyon
Bradi1g45800 5.0kb downstream 5.0kb downstream 5000 false Bd1: 44211475-44216474 Brachypodium distachyon
Bradi1g45800 10.0kb upstream 10.0kb upstream 16636 true Bd1: 44216475-44233110 Brachypodium distachyon
Bradi1g45800 10.0kb upstream 10.0kb upstream 10000 false Bd1: 44223111-44233110 Brachypodium distachyon
Bradi1g45800 10.0kb downstream 10.0kb downstream 16636 true Bd1: 44206475-44223110 Brachypodium distachyon
Bradi1g45800 10.0kb downstream 10.0kb downstream 10000 false Bd1: 44206475-44216474 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574078 5269 Grass View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.22       High
cufflinks 2.266        
cufflinks 2.08        
cufflinks 2.065        
cufflinks 2.919        
cufflinks 2.088        
cufflinks 2.142        
cufflinks 1.76        
cufflinks 2.018        
cufflinks 2.318        
cufflinks 1.141       Low
cufflinks 2.298        
cufflinks 0.779       Low
cufflinks 0.886       Low
cufflinks 1.444        
cufflinks 2.249        
cufflinks 2.645        
cufflinks 3.092       High
cufflinks 4.224       High
cufflinks 2.056        
cufflinks 1.382        
cufflinks 2.671        
cufflinks 1.779        
cufflinks 1.705        
cufflinks 1.958        
cufflinks 1.715        
cufflinks 0.883       Low
cufflinks 1.846        
cufflinks 2.126        
cufflinks 2.098        

0 Strain