Gene : Bradi1g45760 B. distachyon v3.1
Defline:  (1 of 2) PF07172 - Glycine rich protein family (GRP) Genomic Order:  5663
Name:  ? Bradi1g45760 Secondary Identifier:  ? PAC:32806542
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g45760 0.5kb upstream 0.5kb upstream 1647 true Bd1: 44201981-44203627 Brachypodium distachyon
Bradi1g45760 0.5kb upstream 0.5kb upstream 500 false Bd1: 44201981-44202480 Brachypodium distachyon
Bradi1g45760 0.5kb downstream 0.5kb downstream 1647 true Bd1: 44202481-44204127 Brachypodium distachyon
Bradi1g45760 0.5kb downstream 0.5kb downstream 500 false Bd1: 44203628-44204127 Brachypodium distachyon
Bradi1g45760 1.0kb upstream 1.0kb upstream 2147 true Bd1: 44201481-44203627 Brachypodium distachyon
Bradi1g45760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 44201481-44202480 Brachypodium distachyon
Bradi1g45760 1.0kb downstream 1.0kb downstream 2147 true Bd1: 44202481-44204627 Brachypodium distachyon
Bradi1g45760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 44203628-44204627 Brachypodium distachyon
Bradi1g45760 2.0kb upstream 2.0kb upstream 3147 true Bd1: 44200481-44203627 Brachypodium distachyon
Bradi1g45760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 44200481-44202480 Brachypodium distachyon
Bradi1g45760 2.0kb downstream 2.0kb downstream 3147 true Bd1: 44202481-44205627 Brachypodium distachyon
Bradi1g45760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 44203628-44205627 Brachypodium distachyon
Bradi1g45760 5.0kb upstream 5.0kb upstream 6147 true Bd1: 44197481-44203627 Brachypodium distachyon
Bradi1g45760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 44197481-44202480 Brachypodium distachyon
Bradi1g45760 5.0kb downstream 5.0kb downstream 6147 true Bd1: 44202481-44208627 Brachypodium distachyon
Bradi1g45760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 44203628-44208627 Brachypodium distachyon
Bradi1g45760 10.0kb upstream 10.0kb upstream 11147 true Bd1: 44192481-44203627 Brachypodium distachyon
Bradi1g45760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 44192481-44202480 Brachypodium distachyon
Bradi1g45760 10.0kb downstream 10.0kb downstream 11147 true Bd1: 44202481-44213627 Brachypodium distachyon
Bradi1g45760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 44203628-44213627 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590814 5269 Grass View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 176.817     High  
cufflinks 133.051     High  
cufflinks 82.557     High  
cufflinks 128.627     High  
cufflinks 85.984     High  
cufflinks 160.514     High  
cufflinks 135.594     High  
cufflinks 122.356     High  
cufflinks 128.175     High  
cufflinks 183.165     High  
cufflinks 243.212     High  
cufflinks 216.941     High  
cufflinks 288.786     High  
cufflinks 240.092     High  
cufflinks 258.556     High  
cufflinks 150.981     High  
cufflinks 169.92     High  
cufflinks 0.529       Low
cufflinks 47.974     High  
cufflinks 107.633     High  
cufflinks 118.984     High  
cufflinks 114.107     High  
cufflinks 100.346     High  
cufflinks 137.78     High  
cufflinks 131.057     High  
cufflinks 101.851     High  
cufflinks 195.724     High  
cufflinks 84.606     High  
cufflinks 89.823     High  
cufflinks 122.684     High  

0 Strain