Gene : Bradi1g46220 B. distachyon v3.1
Defline:  (1 of 2) K18045 - tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] (SIW14, OCA3) Genomic Order:  5728
Name:  ? Bradi1g46220 Secondary Identifier:  ? PAC:32800320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46220 0.5kb upstream 0.5kb upstream 5033 true Bd1: 44822365-44827397 Brachypodium distachyon
Bradi1g46220 0.5kb upstream 0.5kb upstream 500 false Bd1: 44826898-44827397 Brachypodium distachyon
Bradi1g46220 0.5kb downstream 0.5kb downstream 5033 true Bd1: 44821865-44826897 Brachypodium distachyon
Bradi1g46220 0.5kb downstream 0.5kb downstream 500 false Bd1: 44821865-44822364 Brachypodium distachyon
Bradi1g46220 1.0kb upstream 1.0kb upstream 5533 true Bd1: 44822365-44827897 Brachypodium distachyon
Bradi1g46220 1.0kb upstream 1.0kb upstream 1000 false Bd1: 44826898-44827897 Brachypodium distachyon
Bradi1g46220 1.0kb downstream 1.0kb downstream 5533 true Bd1: 44821365-44826897 Brachypodium distachyon
Bradi1g46220 1.0kb downstream 1.0kb downstream 1000 false Bd1: 44821365-44822364 Brachypodium distachyon
Bradi1g46220 2.0kb upstream 2.0kb upstream 6533 true Bd1: 44822365-44828897 Brachypodium distachyon
Bradi1g46220 2.0kb upstream 2.0kb upstream 2000 false Bd1: 44826898-44828897 Brachypodium distachyon
Bradi1g46220 2.0kb downstream 2.0kb downstream 6533 true Bd1: 44820365-44826897 Brachypodium distachyon
Bradi1g46220 2.0kb downstream 2.0kb downstream 2000 false Bd1: 44820365-44822364 Brachypodium distachyon
Bradi1g46220 5.0kb upstream 5.0kb upstream 9533 true Bd1: 44822365-44831897 Brachypodium distachyon
Bradi1g46220 5.0kb upstream 5.0kb upstream 5000 false Bd1: 44826898-44831897 Brachypodium distachyon
Bradi1g46220 5.0kb downstream 5.0kb downstream 9533 true Bd1: 44817365-44826897 Brachypodium distachyon
Bradi1g46220 5.0kb downstream 5.0kb downstream 5000 false Bd1: 44817365-44822364 Brachypodium distachyon
Bradi1g46220 10.0kb upstream 10.0kb upstream 14533 true Bd1: 44822365-44836897 Brachypodium distachyon
Bradi1g46220 10.0kb upstream 10.0kb upstream 10000 false Bd1: 44826898-44836897 Brachypodium distachyon
Bradi1g46220 10.0kb downstream 10.0kb downstream 14533 true Bd1: 44812365-44826897 Brachypodium distachyon
Bradi1g46220 10.0kb downstream 10.0kb downstream 10000 false Bd1: 44812365-44822364 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578787 5269 Grass View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.041       High
cufflinks 1.861        
cufflinks 2.21        
cufflinks 1.851        
cufflinks 1.628        
cufflinks 1.519        
cufflinks 1.656        
cufflinks 1.531        
cufflinks 1.306        
cufflinks 3.733       High
cufflinks 1.242       Low
cufflinks 1.217       Low
cufflinks 1.584        
cufflinks 1.069       Low
cufflinks 3.222        
cufflinks 2.243        
cufflinks 1.617        
cufflinks 4.136       High
cufflinks 2.143        
cufflinks 1.972        
cufflinks 3.483        
cufflinks 3.295        
cufflinks 1.377        
cufflinks 1.324        
cufflinks 1.486        
cufflinks 2.273        
cufflinks 1.432        
cufflinks 2.822        
cufflinks 4.328       High
cufflinks 2.167        

0 Strain