Gene : Bradi5g18220 B. distachyon v3.1
Defline:  (1 of 1) PTHR10030//PTHR10030:SF27 - ALPHA-L-FUCOSIDASE // ALPHA-L-FUCOSIDASE 1 Genomic Order:  2104
Name:  ? Bradi5g18220 Secondary Identifier:  ? PAC:32811657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g18220 0.5kb upstream 0.5kb upstream 3425 true Bd5: 21420363-21423787 Brachypodium distachyon
Bradi5g18220 0.5kb upstream 0.5kb upstream 500 false Bd5: 21423288-21423787 Brachypodium distachyon
Bradi5g18220 0.5kb downstream 0.5kb downstream 3425 true Bd5: 21419863-21423287 Brachypodium distachyon
Bradi5g18220 0.5kb downstream 0.5kb downstream 500 false Bd5: 21419863-21420362 Brachypodium distachyon
Bradi5g18220 1.0kb upstream 1.0kb upstream 3925 true Bd5: 21420363-21424287 Brachypodium distachyon
Bradi5g18220 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21423288-21424287 Brachypodium distachyon
Bradi5g18220 1.0kb downstream 1.0kb downstream 3925 true Bd5: 21419363-21423287 Brachypodium distachyon
Bradi5g18220 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21419363-21420362 Brachypodium distachyon
Bradi5g18220 2.0kb upstream 2.0kb upstream 4925 true Bd5: 21420363-21425287 Brachypodium distachyon
Bradi5g18220 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21423288-21425287 Brachypodium distachyon
Bradi5g18220 2.0kb downstream 2.0kb downstream 4925 true Bd5: 21418363-21423287 Brachypodium distachyon
Bradi5g18220 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21418363-21420362 Brachypodium distachyon
Bradi5g18220 5.0kb upstream 5.0kb upstream 7925 true Bd5: 21420363-21428287 Brachypodium distachyon
Bradi5g18220 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21423288-21428287 Brachypodium distachyon
Bradi5g18220 5.0kb downstream 5.0kb downstream 7925 true Bd5: 21415363-21423287 Brachypodium distachyon
Bradi5g18220 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21415363-21420362 Brachypodium distachyon
Bradi5g18220 10.0kb upstream 10.0kb upstream 12925 true Bd5: 21420363-21433287 Brachypodium distachyon
Bradi5g18220 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21423288-21433287 Brachypodium distachyon
Bradi5g18220 10.0kb downstream 10.0kb downstream 12925 true Bd5: 21410363-21423287 Brachypodium distachyon
Bradi5g18220 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21410363-21420362 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571880 5269 Grass View MSA
122047264 5273 Angiosperm View MSA
121351387 5274 Embryophyte View MSA
123382147 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.616       Low
cufflinks 5.362        
cufflinks 5.318        
cufflinks 4.428        
cufflinks 2.121       Low
cufflinks 5.235        
cufflinks 4.606        
cufflinks 3.503        
cufflinks 4.217        
cufflinks 2.946        
cufflinks 3.965        
cufflinks 4.663        
cufflinks 3.894        
cufflinks 3.192        
cufflinks 2.998        
cufflinks 4.342        
cufflinks 2.104       Low
cufflinks 6.851       High
cufflinks 4.706        
cufflinks 3.491        
cufflinks 5.384        
cufflinks 4.437        
cufflinks 3.458        
cufflinks 4.197        
cufflinks 3.99        
cufflinks 4.753        
cufflinks 5.011        
cufflinks 4.361        
cufflinks 3.934        
cufflinks 8.292       High

0 Strain