Gene : Bradi5g17790 B. distachyon v3.1
Defline:  (1 of 1) PTHR15615:SF15 - CYCLIN-U2-1-RELATED Genomic Order:  2053
Name:  ? Bradi5g17790 Secondary Identifier:  ? PAC:32811855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17790 0.5kb upstream 0.5kb upstream 1892 true Bd5: 21106233-21108124 Brachypodium distachyon
Bradi5g17790 0.5kb upstream 0.5kb upstream 500 false Bd5: 21106233-21106732 Brachypodium distachyon
Bradi5g17790 0.5kb downstream 0.5kb downstream 1892 true Bd5: 21106733-21108624 Brachypodium distachyon
Bradi5g17790 0.5kb downstream 0.5kb downstream 500 false Bd5: 21108125-21108624 Brachypodium distachyon
Bradi5g17790 1.0kb upstream 1.0kb upstream 2392 true Bd5: 21105733-21108124 Brachypodium distachyon
Bradi5g17790 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21105733-21106732 Brachypodium distachyon
Bradi5g17790 1.0kb downstream 1.0kb downstream 2392 true Bd5: 21106733-21109124 Brachypodium distachyon
Bradi5g17790 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21108125-21109124 Brachypodium distachyon
Bradi5g17790 2.0kb upstream 2.0kb upstream 3392 true Bd5: 21104733-21108124 Brachypodium distachyon
Bradi5g17790 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21104733-21106732 Brachypodium distachyon
Bradi5g17790 2.0kb downstream 2.0kb downstream 3392 true Bd5: 21106733-21110124 Brachypodium distachyon
Bradi5g17790 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21108125-21110124 Brachypodium distachyon
Bradi5g17790 5.0kb upstream 5.0kb upstream 6392 true Bd5: 21101733-21108124 Brachypodium distachyon
Bradi5g17790 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21101733-21106732 Brachypodium distachyon
Bradi5g17790 5.0kb downstream 5.0kb downstream 6392 true Bd5: 21106733-21113124 Brachypodium distachyon
Bradi5g17790 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21108125-21113124 Brachypodium distachyon
Bradi5g17790 10.0kb upstream 10.0kb upstream 11392 true Bd5: 21096733-21108124 Brachypodium distachyon
Bradi5g17790 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21096733-21106732 Brachypodium distachyon
Bradi5g17790 10.0kb downstream 10.0kb downstream 11392 true Bd5: 21106733-21118124 Brachypodium distachyon
Bradi5g17790 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21108125-21118124 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041371 5273 Angiosperm View MSA
124573078 5269 Grass View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.542        
cufflinks 4.813        
cufflinks 3.996        
cufflinks 5.07        
cufflinks 2.558        
cufflinks 4.922        
cufflinks 6.769        
cufflinks 3.841        
cufflinks 4.345        
cufflinks 4.208        
cufflinks 0.255       Low
cufflinks 3.977        
cufflinks 1.569        
cufflinks 0.294       Low
cufflinks 4.381        
cufflinks 5.078        
cufflinks 6.439        
cufflinks 3.729        
cufflinks 5.554        
cufflinks 0.147       Low
cufflinks 4.586        
cufflinks 3.744        
cufflinks 4.913        
cufflinks 5.508        
cufflinks 7.018        
cufflinks 3.318        
cufflinks 0.505       Low
cufflinks 4.457        
cufflinks 3.74        
cufflinks 5.532        

0 Strain