Gene : Bradi1g46415 B. distachyon v3.1
Defline:  (1 of 4) 2.7.8.11 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase Genomic Order:  5757
Name:  ? Bradi1g46415 Secondary Identifier:  ? PAC:32797522
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6351 Brachypodium distachyon pathologic  
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  
Bdistachyon PWY-7625 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46415 0.5kb upstream 0.5kb upstream 5971 true Bd1: 45099321-45105291 Brachypodium distachyon
Bradi1g46415 0.5kb upstream 0.5kb upstream 500 false Bd1: 45099321-45099820 Brachypodium distachyon
Bradi1g46415 0.5kb downstream 0.5kb downstream 5971 true Bd1: 45099821-45105791 Brachypodium distachyon
Bradi1g46415 0.5kb downstream 0.5kb downstream 500 false Bd1: 45105292-45105791 Brachypodium distachyon
Bradi1g46415 1.0kb upstream 1.0kb upstream 6471 true Bd1: 45098821-45105291 Brachypodium distachyon
Bradi1g46415 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45098821-45099820 Brachypodium distachyon
Bradi1g46415 1.0kb downstream 1.0kb downstream 6471 true Bd1: 45099821-45106291 Brachypodium distachyon
Bradi1g46415 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45105292-45106291 Brachypodium distachyon
Bradi1g46415 2.0kb upstream 2.0kb upstream 7471 true Bd1: 45097821-45105291 Brachypodium distachyon
Bradi1g46415 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45097821-45099820 Brachypodium distachyon
Bradi1g46415 2.0kb downstream 2.0kb downstream 7471 true Bd1: 45099821-45107291 Brachypodium distachyon
Bradi1g46415 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45105292-45107291 Brachypodium distachyon
Bradi1g46415 5.0kb upstream 5.0kb upstream 10471 true Bd1: 45094821-45105291 Brachypodium distachyon
Bradi1g46415 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45094821-45099820 Brachypodium distachyon
Bradi1g46415 5.0kb downstream 5.0kb downstream 10471 true Bd1: 45099821-45110291 Brachypodium distachyon
Bradi1g46415 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45105292-45110291 Brachypodium distachyon
Bradi1g46415 10.0kb upstream 10.0kb upstream 15471 true Bd1: 45089821-45105291 Brachypodium distachyon
Bradi1g46415 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45089821-45099820 Brachypodium distachyon
Bradi1g46415 10.0kb downstream 10.0kb downstream 15471 true Bd1: 45099821-45115291 Brachypodium distachyon
Bradi1g46415 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45105292-45115291 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121906679 5273 Angiosperm View MSA
124480019 5269 Grass View MSA
121177182 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.206        
cufflinks 0.255        
cufflinks 0.25        
cufflinks 0.252        
cufflinks 0.096        
cufflinks 0.22        
cufflinks 0.263        
cufflinks 0.181        
cufflinks 0.21        
cufflinks 0.211        
cufflinks 0.069       Low
cufflinks 0.201        
cufflinks 0.092        
cufflinks 0.04     Low Low
cufflinks 0.104        
cufflinks 0.282        
cufflinks 0.226        
cufflinks 0.217        
cufflinks 0.11     Low  
cufflinks 0.017     Low Low
cufflinks 0.298        
cufflinks 0.24        
cufflinks 0.165        
cufflinks 0.166        
cufflinks 0.243        
cufflinks 0.248        
cufflinks 0.048     Low Low
cufflinks 0.201        
cufflinks 0.19        
cufflinks 0.405       High

0 Strain