Gene : Bradi1g46602 B. distachyon v3.1
Defline:  (1 of 1) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Genomic Order:  5785
Name:  ? Bradi1g46602 Secondary Identifier:  ? PAC:32802991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46602 0.5kb upstream 0.5kb upstream 10580 true Bd1: 45278180-45288759 Brachypodium distachyon
Bradi1g46602 0.5kb upstream 0.5kb upstream 500 false Bd1: 45288260-45288759 Brachypodium distachyon
Bradi1g46602 0.5kb downstream 0.5kb downstream 10580 true Bd1: 45277680-45288259 Brachypodium distachyon
Bradi1g46602 0.5kb downstream 0.5kb downstream 500 false Bd1: 45277680-45278179 Brachypodium distachyon
Bradi1g46602 1.0kb upstream 1.0kb upstream 11080 true Bd1: 45278180-45289259 Brachypodium distachyon
Bradi1g46602 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45288260-45289259 Brachypodium distachyon
Bradi1g46602 1.0kb downstream 1.0kb downstream 11080 true Bd1: 45277180-45288259 Brachypodium distachyon
Bradi1g46602 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45277180-45278179 Brachypodium distachyon
Bradi1g46602 2.0kb upstream 2.0kb upstream 12080 true Bd1: 45278180-45290259 Brachypodium distachyon
Bradi1g46602 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45288260-45290259 Brachypodium distachyon
Bradi1g46602 2.0kb downstream 2.0kb downstream 12080 true Bd1: 45276180-45288259 Brachypodium distachyon
Bradi1g46602 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45276180-45278179 Brachypodium distachyon
Bradi1g46602 5.0kb upstream 5.0kb upstream 15080 true Bd1: 45278180-45293259 Brachypodium distachyon
Bradi1g46602 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45288260-45293259 Brachypodium distachyon
Bradi1g46602 5.0kb downstream 5.0kb downstream 15080 true Bd1: 45273180-45288259 Brachypodium distachyon
Bradi1g46602 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45273180-45278179 Brachypodium distachyon
Bradi1g46602 10.0kb upstream 10.0kb upstream 20080 true Bd1: 45278180-45298259 Brachypodium distachyon
Bradi1g46602 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45288260-45298259 Brachypodium distachyon
Bradi1g46602 10.0kb downstream 10.0kb downstream 20080 true Bd1: 45268180-45288259 Brachypodium distachyon
Bradi1g46602 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45268180-45278179 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574445 5269 Grass View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.207        
cufflinks 0.223        
cufflinks 0.216        
cufflinks 0.169        
cufflinks 0.332        
cufflinks 0.212        
cufflinks 0.163        
cufflinks 0.219        
cufflinks 0.194        
cufflinks 0.111        
cufflinks 0.041     Low Low
cufflinks 0.356        
cufflinks 0.025     Low Low
cufflinks 0.021     Low Low
cufflinks 0.219        
cufflinks 0.243        
cufflinks 0.152     Low  
cufflinks 0.595       High
cufflinks 0.15     Low  
cufflinks 0.484       High
cufflinks 0.059     Low Low
cufflinks 0.197        
cufflinks 0.204        
cufflinks 0.222        
cufflinks 0.148        
cufflinks 0.205        
cufflinks 0.015     Low Low
cufflinks 0.139        
cufflinks 0.159        
cufflinks 0.411       High

0 Strain