Gene : Bradi1g46580 B. distachyon v3.1
Defline:  (1 of 1) PTHR11760:SF21 - TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB Genomic Order:  5782
Name:  ? Bradi1g46580 Secondary Identifier:  ? PAC:32806617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46580 0.5kb upstream 0.5kb upstream 3050 true Bd1: 45269491-45272540 Brachypodium distachyon
Bradi1g46580 0.5kb upstream 0.5kb upstream 500 false Bd1: 45272041-45272540 Brachypodium distachyon
Bradi1g46580 0.5kb downstream 0.5kb downstream 3050 true Bd1: 45268991-45272040 Brachypodium distachyon
Bradi1g46580 0.5kb downstream 0.5kb downstream 500 false Bd1: 45268991-45269490 Brachypodium distachyon
Bradi1g46580 1.0kb upstream 1.0kb upstream 3550 true Bd1: 45269491-45273040 Brachypodium distachyon
Bradi1g46580 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45272041-45273040 Brachypodium distachyon
Bradi1g46580 1.0kb downstream 1.0kb downstream 3550 true Bd1: 45268491-45272040 Brachypodium distachyon
Bradi1g46580 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45268491-45269490 Brachypodium distachyon
Bradi1g46580 2.0kb upstream 2.0kb upstream 4550 true Bd1: 45269491-45274040 Brachypodium distachyon
Bradi1g46580 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45272041-45274040 Brachypodium distachyon
Bradi1g46580 2.0kb downstream 2.0kb downstream 4550 true Bd1: 45267491-45272040 Brachypodium distachyon
Bradi1g46580 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45267491-45269490 Brachypodium distachyon
Bradi1g46580 5.0kb upstream 5.0kb upstream 7550 true Bd1: 45269491-45277040 Brachypodium distachyon
Bradi1g46580 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45272041-45277040 Brachypodium distachyon
Bradi1g46580 5.0kb downstream 5.0kb downstream 7550 true Bd1: 45264491-45272040 Brachypodium distachyon
Bradi1g46580 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45264491-45269490 Brachypodium distachyon
Bradi1g46580 10.0kb upstream 10.0kb upstream 12550 true Bd1: 45269491-45282040 Brachypodium distachyon
Bradi1g46580 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45272041-45282040 Brachypodium distachyon
Bradi1g46580 10.0kb downstream 10.0kb downstream 12550 true Bd1: 45259491-45272040 Brachypodium distachyon
Bradi1g46580 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45259491-45269490 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571619 5269 Grass View MSA
122042993 5273 Angiosperm View MSA
121344055 5274 Embryophyte View MSA
123425575 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.788        
cufflinks 2.443        
cufflinks 2.438        
cufflinks 2.645        
cufflinks 1.24       Low
cufflinks 2.378        
cufflinks 2.249        
cufflinks 2.554        
cufflinks 2.84        
cufflinks 2.545        
cufflinks 1.274       Low
cufflinks 1.987        
cufflinks 1.799        
cufflinks 1.261       Low
cufflinks 1.822        
cufflinks 2.574        
cufflinks 1.844        
cufflinks 1.979        
cufflinks 3.522       High
cufflinks 0.57       Low
cufflinks 3.249       High
cufflinks 2.712        
cufflinks 2.59        
cufflinks 2.49        
cufflinks 2.399        
cufflinks 2.587        
cufflinks 2.058        
cufflinks 2.62        
cufflinks 2.721        
cufflinks 2.822        

0 Strain