Gene : Bradi1g46610 B. distachyon v3.1
Defline:  (1 of 2) PTHR11712//PTHR11712:SF286 - POLYKETIDE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  5787
Name:  ? Bradi1g46610 Secondary Identifier:  ? PAC:32802623
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon FASYN-ELONG-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-5156 Brachypodium distachyon pathologic  
Bdistachyon PWY-5971 Brachypodium distachyon pathologic  
Bdistachyon PWY-5989 Brachypodium distachyon pathologic  
Bdistachyon PWY-7388 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46610 0.5kb upstream 0.5kb upstream 5001 true Bd1: 45301351-45306351 Brachypodium distachyon
Bradi1g46610 0.5kb upstream 0.5kb upstream 500 false Bd1: 45301351-45301850 Brachypodium distachyon
Bradi1g46610 0.5kb downstream 0.5kb downstream 5001 true Bd1: 45301851-45306851 Brachypodium distachyon
Bradi1g46610 0.5kb downstream 0.5kb downstream 500 false Bd1: 45306352-45306851 Brachypodium distachyon
Bradi1g46610 1.0kb upstream 1.0kb upstream 5501 true Bd1: 45300851-45306351 Brachypodium distachyon
Bradi1g46610 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45300851-45301850 Brachypodium distachyon
Bradi1g46610 1.0kb downstream 1.0kb downstream 5501 true Bd1: 45301851-45307351 Brachypodium distachyon
Bradi1g46610 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45306352-45307351 Brachypodium distachyon
Bradi1g46610 2.0kb upstream 2.0kb upstream 6501 true Bd1: 45299851-45306351 Brachypodium distachyon
Bradi1g46610 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45299851-45301850 Brachypodium distachyon
Bradi1g46610 2.0kb downstream 2.0kb downstream 6501 true Bd1: 45301851-45308351 Brachypodium distachyon
Bradi1g46610 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45306352-45308351 Brachypodium distachyon
Bradi1g46610 5.0kb upstream 5.0kb upstream 9501 true Bd1: 45296851-45306351 Brachypodium distachyon
Bradi1g46610 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45296851-45301850 Brachypodium distachyon
Bradi1g46610 5.0kb downstream 5.0kb downstream 9501 true Bd1: 45301851-45311351 Brachypodium distachyon
Bradi1g46610 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45306352-45311351 Brachypodium distachyon
Bradi1g46610 10.0kb upstream 10.0kb upstream 14501 true Bd1: 45291851-45306351 Brachypodium distachyon
Bradi1g46610 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45291851-45301850 Brachypodium distachyon
Bradi1g46610 10.0kb downstream 10.0kb downstream 14501 true Bd1: 45301851-45316351 Brachypodium distachyon
Bradi1g46610 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45306352-45316351 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574640 5269 Grass View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.021     High  
cufflinks 25.071     High  
cufflinks 24.541     High  
cufflinks 24.053     High  
cufflinks 12.572     High  
cufflinks 21.401     High  
cufflinks 21.462     High  
cufflinks 20.285     High  
cufflinks 19.132     High  
cufflinks 18.573     High  
cufflinks 2.24       Low
cufflinks 20.736     High  
cufflinks 3.026       Low
cufflinks 2.384       Low
cufflinks 9.638     High  
cufflinks 25.902     High  
cufflinks 25.813     High  
cufflinks 38.883     High High
cufflinks 21.739     High  
cufflinks 4.064       Low
cufflinks 21.749     High  
cufflinks 21.529     High  
cufflinks 16.338     High  
cufflinks 18.558     High  
cufflinks 19.671     High  
cufflinks 21.966     High  
cufflinks 2.747       Low
cufflinks 19.613     High  
cufflinks 21.14     High  
cufflinks 32.366     High  

0 Strain