Gene : Bradi5g17690 B. distachyon v3.1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF134 - AQUAPORIN TRANSPORTER // AQUAPORIN TIP2-3-RELATED Genomic Order:  2041
Name:  ? Bradi5g17690 Secondary Identifier:  ? PAC:32810239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17690 0.5kb upstream 0.5kb upstream 1419 true Bd5: 21052804-21054222 Brachypodium distachyon
Bradi5g17690 0.5kb upstream 0.5kb upstream 500 false Bd5: 21053723-21054222 Brachypodium distachyon
Bradi5g17690 0.5kb downstream 0.5kb downstream 1419 true Bd5: 21052304-21053722 Brachypodium distachyon
Bradi5g17690 0.5kb downstream 0.5kb downstream 500 false Bd5: 21052304-21052803 Brachypodium distachyon
Bradi5g17690 1.0kb upstream 1.0kb upstream 1919 true Bd5: 21052804-21054722 Brachypodium distachyon
Bradi5g17690 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21053723-21054722 Brachypodium distachyon
Bradi5g17690 1.0kb downstream 1.0kb downstream 1919 true Bd5: 21051804-21053722 Brachypodium distachyon
Bradi5g17690 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21051804-21052803 Brachypodium distachyon
Bradi5g17690 2.0kb upstream 2.0kb upstream 2919 true Bd5: 21052804-21055722 Brachypodium distachyon
Bradi5g17690 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21053723-21055722 Brachypodium distachyon
Bradi5g17690 2.0kb downstream 2.0kb downstream 2919 true Bd5: 21050804-21053722 Brachypodium distachyon
Bradi5g17690 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21050804-21052803 Brachypodium distachyon
Bradi5g17690 5.0kb upstream 5.0kb upstream 5919 true Bd5: 21052804-21058722 Brachypodium distachyon
Bradi5g17690 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21053723-21058722 Brachypodium distachyon
Bradi5g17690 5.0kb downstream 5.0kb downstream 5919 true Bd5: 21047804-21053722 Brachypodium distachyon
Bradi5g17690 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21047804-21052803 Brachypodium distachyon
Bradi5g17690 10.0kb upstream 10.0kb upstream 10919 true Bd5: 21052804-21063722 Brachypodium distachyon
Bradi5g17690 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21053723-21063722 Brachypodium distachyon
Bradi5g17690 10.0kb downstream 10.0kb downstream 10919 true Bd5: 21042804-21053722 Brachypodium distachyon
Bradi5g17690 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21042804-21052803 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584121 5269 Grass View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.942     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  

0 Strain