Gene : Bradi1g46640 B. distachyon v3.1
Defline:  (1 of 2) PTHR23426//PTHR23426:SF31 - FERREDOXIN/ADRENODOXIN // SUBFAMILY NOT NAMED Genomic Order:  5791
Name:  ? Bradi1g46640 Secondary Identifier:  ? PAC:32795868
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-1507 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46640 0.5kb upstream 0.5kb upstream 3395 true Bd1: 45319362-45322756 Brachypodium distachyon
Bradi1g46640 0.5kb upstream 0.5kb upstream 500 false Bd1: 45322257-45322756 Brachypodium distachyon
Bradi1g46640 0.5kb downstream 0.5kb downstream 3395 true Bd1: 45318862-45322256 Brachypodium distachyon
Bradi1g46640 0.5kb downstream 0.5kb downstream 500 false Bd1: 45318862-45319361 Brachypodium distachyon
Bradi1g46640 1.0kb upstream 1.0kb upstream 3895 true Bd1: 45319362-45323256 Brachypodium distachyon
Bradi1g46640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45322257-45323256 Brachypodium distachyon
Bradi1g46640 1.0kb downstream 1.0kb downstream 3895 true Bd1: 45318362-45322256 Brachypodium distachyon
Bradi1g46640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45318362-45319361 Brachypodium distachyon
Bradi1g46640 2.0kb upstream 2.0kb upstream 4895 true Bd1: 45319362-45324256 Brachypodium distachyon
Bradi1g46640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45322257-45324256 Brachypodium distachyon
Bradi1g46640 2.0kb downstream 2.0kb downstream 4895 true Bd1: 45317362-45322256 Brachypodium distachyon
Bradi1g46640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45317362-45319361 Brachypodium distachyon
Bradi1g46640 5.0kb upstream 5.0kb upstream 7895 true Bd1: 45319362-45327256 Brachypodium distachyon
Bradi1g46640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45322257-45327256 Brachypodium distachyon
Bradi1g46640 5.0kb downstream 5.0kb downstream 7895 true Bd1: 45314362-45322256 Brachypodium distachyon
Bradi1g46640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45314362-45319361 Brachypodium distachyon
Bradi1g46640 10.0kb upstream 10.0kb upstream 12895 true Bd1: 45319362-45332256 Brachypodium distachyon
Bradi1g46640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45322257-45332256 Brachypodium distachyon
Bradi1g46640 10.0kb downstream 10.0kb downstream 12895 true Bd1: 45309362-45322256 Brachypodium distachyon
Bradi1g46640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45309362-45319361 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589050 5269 Grass View MSA
122043528 5273 Angiosperm View MSA
121349592 5274 Embryophyte View MSA
123425610 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.994        
cufflinks 6.593        
cufflinks 6.724        
cufflinks 10.8     High  
cufflinks 7.806        
cufflinks 6.564        
cufflinks 6.487        
cufflinks 5.634        
cufflinks 5.812        
cufflinks 14.26     High High
cufflinks 3.372       Low
cufflinks 5.521        
cufflinks 2.905       Low
cufflinks 3.847       Low
cufflinks 8.355        
cufflinks 4.834       Low
cufflinks 10.959        
cufflinks 6.28        
cufflinks 13.739     High High
cufflinks 22.289     High High
cufflinks 10.329        
cufflinks 6.079        
cufflinks 6.374        
cufflinks 5.78        
cufflinks 8.334        
cufflinks 11.356     High  
cufflinks 4.112       Low
cufflinks 10.797     High  
cufflinks 9.22        
cufflinks 8.601        

0 Strain