Gene : Bradi1g46900 B. distachyon v3.1
Defline:  (1 of 1) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Genomic Order:  5832
Name:  ? Bradi1g46900 Secondary Identifier:  ? PAC:32806230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46900 0.5kb upstream 0.5kb upstream 7440 true Bd1: 45599641-45607080 Brachypodium distachyon
Bradi1g46900 0.5kb upstream 0.5kb upstream 500 false Bd1: 45606581-45607080 Brachypodium distachyon
Bradi1g46900 0.5kb downstream 0.5kb downstream 7440 true Bd1: 45599141-45606580 Brachypodium distachyon
Bradi1g46900 0.5kb downstream 0.5kb downstream 500 false Bd1: 45599141-45599640 Brachypodium distachyon
Bradi1g46900 1.0kb upstream 1.0kb upstream 7940 true Bd1: 45599641-45607580 Brachypodium distachyon
Bradi1g46900 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45606581-45607580 Brachypodium distachyon
Bradi1g46900 1.0kb downstream 1.0kb downstream 7940 true Bd1: 45598641-45606580 Brachypodium distachyon
Bradi1g46900 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45598641-45599640 Brachypodium distachyon
Bradi1g46900 2.0kb upstream 2.0kb upstream 8940 true Bd1: 45599641-45608580 Brachypodium distachyon
Bradi1g46900 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45606581-45608580 Brachypodium distachyon
Bradi1g46900 2.0kb downstream 2.0kb downstream 8940 true Bd1: 45597641-45606580 Brachypodium distachyon
Bradi1g46900 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45597641-45599640 Brachypodium distachyon
Bradi1g46900 5.0kb upstream 5.0kb upstream 11940 true Bd1: 45599641-45611580 Brachypodium distachyon
Bradi1g46900 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45606581-45611580 Brachypodium distachyon
Bradi1g46900 5.0kb downstream 5.0kb downstream 11940 true Bd1: 45594641-45606580 Brachypodium distachyon
Bradi1g46900 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45594641-45599640 Brachypodium distachyon
Bradi1g46900 10.0kb upstream 10.0kb upstream 16940 true Bd1: 45599641-45616580 Brachypodium distachyon
Bradi1g46900 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45606581-45616580 Brachypodium distachyon
Bradi1g46900 10.0kb downstream 10.0kb downstream 16940 true Bd1: 45589641-45606580 Brachypodium distachyon
Bradi1g46900 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45589641-45599640 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576863 5269 Grass View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.394        
cufflinks 0.335        
cufflinks 0.449        
cufflinks 0.328        
cufflinks 0.388        
cufflinks 0.347        
cufflinks 0.337        
cufflinks 0.417        
cufflinks 0.336        
cufflinks 0.526       High
cufflinks 0.488        
cufflinks 0.354        
cufflinks 0.417        
cufflinks 0.376        
cufflinks 0.277       Low
cufflinks 0.331        
cufflinks 0.338        
cufflinks 0.447        
cufflinks 0.533       High
cufflinks 0.385        
cufflinks 0.29       Low
cufflinks 0.544       High
cufflinks 0.407        
cufflinks 0.332        
cufflinks 0.323        
cufflinks 0.521       High
cufflinks 0.565       High
cufflinks 0.485        
cufflinks 0.407        
cufflinks 0.367        

0 Strain