Gene : Bradi1g47080 B. distachyon v3.1
Defline:  (1 of 1) PTHR19378:SF0 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 3 Genomic Order:  5856
Name:  ? Bradi1g47080 Secondary Identifier:  ? PAC:32795608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47080 0.5kb upstream 0.5kb upstream 11087 true Bd1: 45791010-45802096 Brachypodium distachyon
Bradi1g47080 0.5kb upstream 0.5kb upstream 500 false Bd1: 45801597-45802096 Brachypodium distachyon
Bradi1g47080 0.5kb downstream 0.5kb downstream 11087 true Bd1: 45790510-45801596 Brachypodium distachyon
Bradi1g47080 0.5kb downstream 0.5kb downstream 500 false Bd1: 45790510-45791009 Brachypodium distachyon
Bradi1g47080 1.0kb upstream 1.0kb upstream 11587 true Bd1: 45791010-45802596 Brachypodium distachyon
Bradi1g47080 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45801597-45802596 Brachypodium distachyon
Bradi1g47080 1.0kb downstream 1.0kb downstream 11587 true Bd1: 45790010-45801596 Brachypodium distachyon
Bradi1g47080 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45790010-45791009 Brachypodium distachyon
Bradi1g47080 2.0kb upstream 2.0kb upstream 12587 true Bd1: 45791010-45803596 Brachypodium distachyon
Bradi1g47080 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45801597-45803596 Brachypodium distachyon
Bradi1g47080 2.0kb downstream 2.0kb downstream 12587 true Bd1: 45789010-45801596 Brachypodium distachyon
Bradi1g47080 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45789010-45791009 Brachypodium distachyon
Bradi1g47080 5.0kb upstream 5.0kb upstream 15587 true Bd1: 45791010-45806596 Brachypodium distachyon
Bradi1g47080 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45801597-45806596 Brachypodium distachyon
Bradi1g47080 5.0kb downstream 5.0kb downstream 15587 true Bd1: 45786010-45801596 Brachypodium distachyon
Bradi1g47080 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45786010-45791009 Brachypodium distachyon
Bradi1g47080 10.0kb upstream 10.0kb upstream 20587 true Bd1: 45791010-45811596 Brachypodium distachyon
Bradi1g47080 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45801597-45811596 Brachypodium distachyon
Bradi1g47080 10.0kb downstream 10.0kb downstream 20587 true Bd1: 45781010-45801596 Brachypodium distachyon
Bradi1g47080 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45781010-45791009 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583407 5269 Grass View MSA
122046057 5273 Angiosperm View MSA
121345822 5274 Embryophyte View MSA
123380274 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.155        
cufflinks 0.16        
cufflinks 0.161        
cufflinks 0.186        
cufflinks 0.09        
cufflinks 0.151        
cufflinks 0.138        
cufflinks 0.124        
cufflinks 0.144        
cufflinks 0.097     Low  
cufflinks 0.04     Low Low
cufflinks 0.126        
cufflinks 0.022     Low Low
cufflinks 0.025     Low Low
cufflinks 0.076        
cufflinks 0.155        
cufflinks 0.124     Low  
cufflinks 0.3       High
cufflinks 0.118     Low  
cufflinks 0.022     Low Low
cufflinks 0.199        
cufflinks 0.158        
cufflinks 0.122        
cufflinks 0.128        
cufflinks 0.148        
cufflinks 0.162        
cufflinks 0.023     Low Low
cufflinks 0.131        
cufflinks 0.128        
cufflinks 0.223       High

0 Strain