Gene : Bradi1g47277 B. distachyon v3.1
Defline:  (1 of 1) PTHR24223:SF232 - SERINE PROTEASE/ABC TRANSPORTER B FAMILY PROTEIN TAGB-RELATED Genomic Order:  5881
Name:  ? Bradi1g47277 Secondary Identifier:  ? PAC:32792735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g47277 0.5kb upstream 0.5kb upstream 14436 true Bd1: 45935252-45949687 Brachypodium distachyon
Bradi1g47277 0.5kb upstream 0.5kb upstream 500 false Bd1: 45949188-45949687 Brachypodium distachyon
Bradi1g47277 0.5kb downstream 0.5kb downstream 14436 true Bd1: 45934752-45949187 Brachypodium distachyon
Bradi1g47277 0.5kb downstream 0.5kb downstream 500 false Bd1: 45934752-45935251 Brachypodium distachyon
Bradi1g47277 1.0kb upstream 1.0kb upstream 14936 true Bd1: 45935252-45950187 Brachypodium distachyon
Bradi1g47277 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45949188-45950187 Brachypodium distachyon
Bradi1g47277 1.0kb downstream 1.0kb downstream 14936 true Bd1: 45934252-45949187 Brachypodium distachyon
Bradi1g47277 1.0kb downstream 1.0kb downstream 1000 false Bd1: 45934252-45935251 Brachypodium distachyon
Bradi1g47277 2.0kb upstream 2.0kb upstream 15936 true Bd1: 45935252-45951187 Brachypodium distachyon
Bradi1g47277 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45949188-45951187 Brachypodium distachyon
Bradi1g47277 2.0kb downstream 2.0kb downstream 15936 true Bd1: 45933252-45949187 Brachypodium distachyon
Bradi1g47277 2.0kb downstream 2.0kb downstream 2000 false Bd1: 45933252-45935251 Brachypodium distachyon
Bradi1g47277 5.0kb upstream 5.0kb upstream 18936 true Bd1: 45935252-45954187 Brachypodium distachyon
Bradi1g47277 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45949188-45954187 Brachypodium distachyon
Bradi1g47277 5.0kb downstream 5.0kb downstream 18936 true Bd1: 45930252-45949187 Brachypodium distachyon
Bradi1g47277 5.0kb downstream 5.0kb downstream 5000 false Bd1: 45930252-45935251 Brachypodium distachyon
Bradi1g47277 10.0kb upstream 10.0kb upstream 23936 true Bd1: 45935252-45959187 Brachypodium distachyon
Bradi1g47277 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45949188-45959187 Brachypodium distachyon
Bradi1g47277 10.0kb downstream 10.0kb downstream 23936 true Bd1: 45925252-45949187 Brachypodium distachyon
Bradi1g47277 10.0kb downstream 10.0kb downstream 10000 false Bd1: 45925252-45935251 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578952 5269 Grass View MSA
122042350 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346699 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.426        
cufflinks 1.188        
cufflinks 0.899        
cufflinks 1.195        
cufflinks 0.272       Low
cufflinks 0.542        
cufflinks 0.667        
cufflinks 0.833        
cufflinks 0.861        
cufflinks 0.596        
cufflinks 1.369       High
cufflinks 0.651        
cufflinks 0.91        
cufflinks 0.99        
cufflinks 0.528        
cufflinks 0.788        
cufflinks 0.339       Low
cufflinks 4.365       High
cufflinks 0.469        
cufflinks 0.341       Low
cufflinks 0.91        
cufflinks 0.992        
cufflinks 0.977        
cufflinks 0.83        
cufflinks 0.622        
cufflinks 0.804        
cufflinks 0.975        
cufflinks 0.903        
cufflinks 0.878        
cufflinks 0.568        

0 Strain