Gene : Bradi1g52340 B. distachyon v3.1
Defline:  (1 of 2) 2.3.2.5 - Glutaminyl-peptide cyclotransferase / Glutaminyl-tRNA cyclotransferase Genomic Order:  6571
Name:  ? Bradi1g52340 Secondary Identifier:  ? PAC:32796993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52340 0.5kb upstream 0.5kb upstream 4203 true Bd1: 50818568-50822770 Brachypodium distachyon
Bradi1g52340 0.5kb upstream 0.5kb upstream 500 false Bd1: 50822271-50822770 Brachypodium distachyon
Bradi1g52340 0.5kb downstream 0.5kb downstream 4203 true Bd1: 50818068-50822270 Brachypodium distachyon
Bradi1g52340 0.5kb downstream 0.5kb downstream 500 false Bd1: 50818068-50818567 Brachypodium distachyon
Bradi1g52340 1.0kb upstream 1.0kb upstream 4703 true Bd1: 50818568-50823270 Brachypodium distachyon
Bradi1g52340 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50822271-50823270 Brachypodium distachyon
Bradi1g52340 1.0kb downstream 1.0kb downstream 4703 true Bd1: 50817568-50822270 Brachypodium distachyon
Bradi1g52340 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50817568-50818567 Brachypodium distachyon
Bradi1g52340 2.0kb upstream 2.0kb upstream 5703 true Bd1: 50818568-50824270 Brachypodium distachyon
Bradi1g52340 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50822271-50824270 Brachypodium distachyon
Bradi1g52340 2.0kb downstream 2.0kb downstream 5703 true Bd1: 50816568-50822270 Brachypodium distachyon
Bradi1g52340 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50816568-50818567 Brachypodium distachyon
Bradi1g52340 5.0kb upstream 5.0kb upstream 8703 true Bd1: 50818568-50827270 Brachypodium distachyon
Bradi1g52340 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50822271-50827270 Brachypodium distachyon
Bradi1g52340 5.0kb downstream 5.0kb downstream 8703 true Bd1: 50813568-50822270 Brachypodium distachyon
Bradi1g52340 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50813568-50818567 Brachypodium distachyon
Bradi1g52340 10.0kb upstream 10.0kb upstream 13703 true Bd1: 50818568-50832270 Brachypodium distachyon
Bradi1g52340 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50822271-50832270 Brachypodium distachyon
Bradi1g52340 10.0kb downstream 10.0kb downstream 13703 true Bd1: 50808568-50822270 Brachypodium distachyon
Bradi1g52340 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50808568-50818567 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575182 5269 Grass View MSA
122047891 5273 Angiosperm View MSA
121348416 5274 Embryophyte View MSA
123426276 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.457        
cufflinks 3.875        
cufflinks 3.761        
cufflinks 3.172        
cufflinks 2.764        
cufflinks 3.324        
cufflinks 3.553        
cufflinks 3.047        
cufflinks 3.506        
cufflinks 3.484        
cufflinks 2.747        
cufflinks 3.07        
cufflinks 2.75        
cufflinks 2.488       Low
cufflinks 2.789        
cufflinks 3.579        
cufflinks 5.344        
cufflinks 8.329       High
cufflinks 9.924       High
cufflinks 3.073        
cufflinks 8.089       High
cufflinks 3.415        
cufflinks 3.28        
cufflinks 3.386        
cufflinks 3.198        
cufflinks 3.866        
cufflinks 3.438        
cufflinks 3.565        
cufflinks 3.733        
cufflinks 4.806        

0 Strain