Gene : Bradi1g52670 B. distachyon v3.1
Defline:  (1 of 1) PTHR10196:SF9 - XYLULOSE KINASE-RELATED Genomic Order:  6621
Name:  ? Bradi1g52670 Secondary Identifier:  ? PAC:32800351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52670 0.5kb upstream 0.5kb upstream 3480 true Bd1: 51135976-51139455 Brachypodium distachyon
Bradi1g52670 0.5kb upstream 0.5kb upstream 500 false Bd1: 51138956-51139455 Brachypodium distachyon
Bradi1g52670 0.5kb downstream 0.5kb downstream 3480 true Bd1: 51135476-51138955 Brachypodium distachyon
Bradi1g52670 0.5kb downstream 0.5kb downstream 500 false Bd1: 51135476-51135975 Brachypodium distachyon
Bradi1g52670 1.0kb upstream 1.0kb upstream 3980 true Bd1: 51135976-51139955 Brachypodium distachyon
Bradi1g52670 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51138956-51139955 Brachypodium distachyon
Bradi1g52670 1.0kb downstream 1.0kb downstream 3980 true Bd1: 51134976-51138955 Brachypodium distachyon
Bradi1g52670 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51134976-51135975 Brachypodium distachyon
Bradi1g52670 2.0kb upstream 2.0kb upstream 4980 true Bd1: 51135976-51140955 Brachypodium distachyon
Bradi1g52670 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51138956-51140955 Brachypodium distachyon
Bradi1g52670 2.0kb downstream 2.0kb downstream 4980 true Bd1: 51133976-51138955 Brachypodium distachyon
Bradi1g52670 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51133976-51135975 Brachypodium distachyon
Bradi1g52670 5.0kb upstream 5.0kb upstream 7980 true Bd1: 51135976-51143955 Brachypodium distachyon
Bradi1g52670 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51138956-51143955 Brachypodium distachyon
Bradi1g52670 5.0kb downstream 5.0kb downstream 7980 true Bd1: 51130976-51138955 Brachypodium distachyon
Bradi1g52670 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51130976-51135975 Brachypodium distachyon
Bradi1g52670 10.0kb upstream 10.0kb upstream 12980 true Bd1: 51135976-51148955 Brachypodium distachyon
Bradi1g52670 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51138956-51148955 Brachypodium distachyon
Bradi1g52670 10.0kb downstream 10.0kb downstream 12980 true Bd1: 51125976-51138955 Brachypodium distachyon
Bradi1g52670 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51125976-51135975 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581330 5269 Grass View MSA
122044268 5273 Angiosperm View MSA
121310263 5274 Embryophyte View MSA
123425249 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.077        
cufflinks 30.446     High  
cufflinks 33.237     High High
cufflinks 33.842     High High
cufflinks 7.966        
cufflinks 17.261     High  
cufflinks 22.799     High  
cufflinks 14.627     High  
cufflinks 15.12     High  
cufflinks 17.774     High  
cufflinks 6.642        
cufflinks 14.591     High  
cufflinks 15.9     High  
cufflinks 7.437        
cufflinks 10.806     High  
cufflinks 17.806     High  
cufflinks 9.694        
cufflinks 0.414       Low
cufflinks 9.368        
cufflinks 1.518       Low
cufflinks 7.59        
cufflinks 21.516     High  
cufflinks 16.469     High  
cufflinks 14.607     High  
cufflinks 17.665     High  
cufflinks 30.862     High High
cufflinks 14.524     High  
cufflinks 28.67     High  
cufflinks 27.125     High  
cufflinks 10.268        

0 Strain