Gene : Bradi1g52680 B. distachyon v3.1
Defline:  (1 of 1) PTHR10774:SF51 - C2 CALCIUM/LIPID-BINDING ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE-RELATED Genomic Order:  6622
Name:  ? Bradi1g52680 Secondary Identifier:  ? PAC:32799371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52680 0.5kb upstream 0.5kb upstream 11167 true Bd1: 51138956-51150122 Brachypodium distachyon
Bradi1g52680 0.5kb upstream 0.5kb upstream 500 false Bd1: 51149623-51150122 Brachypodium distachyon
Bradi1g52680 0.5kb downstream 0.5kb downstream 11167 true Bd1: 51138456-51149622 Brachypodium distachyon
Bradi1g52680 0.5kb downstream 0.5kb downstream 500 false Bd1: 51138456-51138955 Brachypodium distachyon
Bradi1g52680 1.0kb upstream 1.0kb upstream 11667 true Bd1: 51138956-51150622 Brachypodium distachyon
Bradi1g52680 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51149623-51150622 Brachypodium distachyon
Bradi1g52680 1.0kb downstream 1.0kb downstream 11667 true Bd1: 51137956-51149622 Brachypodium distachyon
Bradi1g52680 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51137956-51138955 Brachypodium distachyon
Bradi1g52680 2.0kb upstream 2.0kb upstream 12667 true Bd1: 51138956-51151622 Brachypodium distachyon
Bradi1g52680 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51149623-51151622 Brachypodium distachyon
Bradi1g52680 2.0kb downstream 2.0kb downstream 12667 true Bd1: 51136956-51149622 Brachypodium distachyon
Bradi1g52680 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51136956-51138955 Brachypodium distachyon
Bradi1g52680 5.0kb upstream 5.0kb upstream 15667 true Bd1: 51138956-51154622 Brachypodium distachyon
Bradi1g52680 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51149623-51154622 Brachypodium distachyon
Bradi1g52680 5.0kb downstream 5.0kb downstream 15667 true Bd1: 51133956-51149622 Brachypodium distachyon
Bradi1g52680 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51133956-51138955 Brachypodium distachyon
Bradi1g52680 10.0kb upstream 10.0kb upstream 20667 true Bd1: 51138956-51159622 Brachypodium distachyon
Bradi1g52680 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51149623-51159622 Brachypodium distachyon
Bradi1g52680 10.0kb downstream 10.0kb downstream 20667 true Bd1: 51128956-51149622 Brachypodium distachyon
Bradi1g52680 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51128956-51138955 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579269 5269 Grass View MSA
122044587 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346327 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.142     High  
cufflinks 8.708        
cufflinks 9.107        
cufflinks 8.519        
cufflinks 8.735        
cufflinks 8.658        
cufflinks 8.072        
cufflinks 8.206        
cufflinks 8.315        
cufflinks 6.897        
cufflinks 5.372       Low
cufflinks 9.778     High  
cufflinks 8.401     High  
cufflinks 4.992       Low
cufflinks 11.03     High  
cufflinks 8.417        
cufflinks 9.176        
cufflinks 15.456     High High
cufflinks 13.071     High High
cufflinks 6.809        
cufflinks 15.117     High High
cufflinks 8.908        
cufflinks 8.293        
cufflinks 8.556        
cufflinks 7.785        
cufflinks 8.924        
cufflinks 7.755        
cufflinks 8.159        
cufflinks 7.95        
cufflinks 14.316     High High

0 Strain