Gene : Bradi1g52630 B. distachyon v3.1
Defline:  (1 of 1) PTHR23111//PTHR23111:SF29 - ZINC FINGER PROTEIN Genomic Order:  6613
Name:  ? Bradi1g52630 Secondary Identifier:  ? PAC:32805896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52630 0.5kb upstream 0.5kb upstream 5608 true Bd1: 51089972-51095579 Brachypodium distachyon
Bradi1g52630 0.5kb upstream 0.5kb upstream 500 false Bd1: 51095080-51095579 Brachypodium distachyon
Bradi1g52630 0.5kb downstream 0.5kb downstream 5608 true Bd1: 51089472-51095079 Brachypodium distachyon
Bradi1g52630 0.5kb downstream 0.5kb downstream 500 false Bd1: 51089472-51089971 Brachypodium distachyon
Bradi1g52630 1.0kb upstream 1.0kb upstream 6108 true Bd1: 51089972-51096079 Brachypodium distachyon
Bradi1g52630 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51095080-51096079 Brachypodium distachyon
Bradi1g52630 1.0kb downstream 1.0kb downstream 6108 true Bd1: 51088972-51095079 Brachypodium distachyon
Bradi1g52630 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51088972-51089971 Brachypodium distachyon
Bradi1g52630 2.0kb upstream 2.0kb upstream 7108 true Bd1: 51089972-51097079 Brachypodium distachyon
Bradi1g52630 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51095080-51097079 Brachypodium distachyon
Bradi1g52630 2.0kb downstream 2.0kb downstream 7108 true Bd1: 51087972-51095079 Brachypodium distachyon
Bradi1g52630 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51087972-51089971 Brachypodium distachyon
Bradi1g52630 5.0kb upstream 5.0kb upstream 10108 true Bd1: 51089972-51100079 Brachypodium distachyon
Bradi1g52630 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51095080-51100079 Brachypodium distachyon
Bradi1g52630 5.0kb downstream 5.0kb downstream 10108 true Bd1: 51084972-51095079 Brachypodium distachyon
Bradi1g52630 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51084972-51089971 Brachypodium distachyon
Bradi1g52630 10.0kb upstream 10.0kb upstream 15108 true Bd1: 51089972-51105079 Brachypodium distachyon
Bradi1g52630 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51095080-51105079 Brachypodium distachyon
Bradi1g52630 10.0kb downstream 10.0kb downstream 15108 true Bd1: 51079972-51095079 Brachypodium distachyon
Bradi1g52630 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51079972-51089971 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578146 5269 Grass View MSA
122043265 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.262        
cufflinks 3.659        
cufflinks 2.902        
cufflinks 3.134        
cufflinks 0.617       Low
cufflinks 3.021        
cufflinks 2.965        
cufflinks 2.537        
cufflinks 2.979        
cufflinks 1.286       Low
cufflinks 2.919        
cufflinks 2.647        
cufflinks 1.934        
cufflinks 2.287        
cufflinks 1.986        
cufflinks 3.207        
cufflinks 1.992        
cufflinks 4.789       High
cufflinks 1.434        
cufflinks 0.622       Low
cufflinks 2.684        
cufflinks 2.417        
cufflinks 2.52        
cufflinks 2.534        
cufflinks 3.103        
cufflinks 1.999        
cufflinks 2.976        
cufflinks 2.104        
cufflinks 2.059        
cufflinks 3.152        

0 Strain