Gene : Bradi1g52640 B. distachyon v3.1
Defline:  (1 of 1) K04508 - transducin (beta)-like 1 (TBL1) Genomic Order:  6614
Name:  ? Bradi1g52640 Secondary Identifier:  ? PAC:32803139
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52640 0.5kb upstream 0.5kb upstream 10420 true Bd1: 51097660-51108079 Brachypodium distachyon
Bradi1g52640 0.5kb upstream 0.5kb upstream 500 false Bd1: 51107580-51108079 Brachypodium distachyon
Bradi1g52640 0.5kb downstream 0.5kb downstream 10420 true Bd1: 51097160-51107579 Brachypodium distachyon
Bradi1g52640 0.5kb downstream 0.5kb downstream 500 false Bd1: 51097160-51097659 Brachypodium distachyon
Bradi1g52640 1.0kb upstream 1.0kb upstream 10920 true Bd1: 51097660-51108579 Brachypodium distachyon
Bradi1g52640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51107580-51108579 Brachypodium distachyon
Bradi1g52640 1.0kb downstream 1.0kb downstream 10920 true Bd1: 51096660-51107579 Brachypodium distachyon
Bradi1g52640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51096660-51097659 Brachypodium distachyon
Bradi1g52640 2.0kb upstream 2.0kb upstream 11920 true Bd1: 51097660-51109579 Brachypodium distachyon
Bradi1g52640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51107580-51109579 Brachypodium distachyon
Bradi1g52640 2.0kb downstream 2.0kb downstream 11920 true Bd1: 51095660-51107579 Brachypodium distachyon
Bradi1g52640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51095660-51097659 Brachypodium distachyon
Bradi1g52640 5.0kb upstream 5.0kb upstream 14920 true Bd1: 51097660-51112579 Brachypodium distachyon
Bradi1g52640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51107580-51112579 Brachypodium distachyon
Bradi1g52640 5.0kb downstream 5.0kb downstream 14920 true Bd1: 51092660-51107579 Brachypodium distachyon
Bradi1g52640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51092660-51097659 Brachypodium distachyon
Bradi1g52640 10.0kb upstream 10.0kb upstream 19920 true Bd1: 51097660-51117579 Brachypodium distachyon
Bradi1g52640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51107580-51117579 Brachypodium distachyon
Bradi1g52640 10.0kb downstream 10.0kb downstream 19920 true Bd1: 51087660-51107579 Brachypodium distachyon
Bradi1g52640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51087660-51097659 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574844 5269 Grass View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.358       Low
cufflinks 8.325        
cufflinks 9.534        
cufflinks 7.399        
cufflinks 6.71        
cufflinks 7.699        
cufflinks 7.592        
cufflinks 7.018        
cufflinks 7.757        
cufflinks 6.674        
cufflinks 8.509        
cufflinks 7.58        
cufflinks 6.947        
cufflinks 6.189        
cufflinks 5.673       Low
cufflinks 7.163        
cufflinks 6.449        
cufflinks 9.749       High
cufflinks 10.044       High
cufflinks 8.992        
cufflinks 6.884        
cufflinks 9.161        
cufflinks 7.63        
cufflinks 7.436        
cufflinks 7.569        
cufflinks 8.802        
cufflinks 8.983     High  
cufflinks 8.827        
cufflinks 8.259        
cufflinks 8.377        

0 Strain