Gene : Bradi1g53060 B. distachyon v3.1
Defline:  (1 of 1) PTHR10996:SF108 - D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN Genomic Order:  6650
Name:  ? Bradi1g53060 Secondary Identifier:  ? PAC:32793101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g53060 0.5kb upstream 0.5kb upstream 7516 true Bd1: 51613054-51620569 Brachypodium distachyon
Bradi1g53060 0.5kb upstream 0.5kb upstream 500 false Bd1: 51620070-51620569 Brachypodium distachyon
Bradi1g53060 0.5kb downstream 0.5kb downstream 7516 true Bd1: 51612554-51620069 Brachypodium distachyon
Bradi1g53060 0.5kb downstream 0.5kb downstream 500 false Bd1: 51612554-51613053 Brachypodium distachyon
Bradi1g53060 1.0kb upstream 1.0kb upstream 8016 true Bd1: 51613054-51621069 Brachypodium distachyon
Bradi1g53060 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51620070-51621069 Brachypodium distachyon
Bradi1g53060 1.0kb downstream 1.0kb downstream 8016 true Bd1: 51612054-51620069 Brachypodium distachyon
Bradi1g53060 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51612054-51613053 Brachypodium distachyon
Bradi1g53060 2.0kb upstream 2.0kb upstream 9016 true Bd1: 51613054-51622069 Brachypodium distachyon
Bradi1g53060 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51620070-51622069 Brachypodium distachyon
Bradi1g53060 2.0kb downstream 2.0kb downstream 9016 true Bd1: 51611054-51620069 Brachypodium distachyon
Bradi1g53060 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51611054-51613053 Brachypodium distachyon
Bradi1g53060 5.0kb upstream 5.0kb upstream 12016 true Bd1: 51613054-51625069 Brachypodium distachyon
Bradi1g53060 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51620070-51625069 Brachypodium distachyon
Bradi1g53060 5.0kb downstream 5.0kb downstream 12016 true Bd1: 51608054-51620069 Brachypodium distachyon
Bradi1g53060 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51608054-51613053 Brachypodium distachyon
Bradi1g53060 10.0kb upstream 10.0kb upstream 17016 true Bd1: 51613054-51630069 Brachypodium distachyon
Bradi1g53060 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51620070-51630069 Brachypodium distachyon
Bradi1g53060 10.0kb downstream 10.0kb downstream 17016 true Bd1: 51603054-51620069 Brachypodium distachyon
Bradi1g53060 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51603054-51613053 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587466 5269 Grass View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.482        
cufflinks 1.73        
cufflinks 1.486        
cufflinks 1.904        
cufflinks 0.749        
cufflinks 1.388        
cufflinks 1.413        
cufflinks 1.099        
cufflinks 1.171        
cufflinks 1.152        
cufflinks 0.506       Low
cufflinks 1.343        
cufflinks 0.288       Low
cufflinks 0.35       Low
cufflinks 0.8        
cufflinks 1.833        
cufflinks 1.798        
cufflinks 2.268       High
cufflinks 1.431        
cufflinks 0.204       Low
cufflinks 1.835        
cufflinks 1.328        
cufflinks 0.937        
cufflinks 1.203        
cufflinks 1.458        
cufflinks 1.814        
cufflinks 0.225       Low
cufflinks 1.274        
cufflinks 1.253        
cufflinks 1.929        

0 Strain