Gene : Bradi1g53000 B. distachyon v3.1
Defline:  (1 of 62) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  6644
Name:  ? Bradi1g53000 Secondary Identifier:  ? PAC:32801066
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g53000 0.5kb upstream 0.5kb upstream 3260 true Bd1: 51568186-51571445 Brachypodium distachyon
Bradi1g53000 0.5kb upstream 0.5kb upstream 500 false Bd1: 51568186-51568685 Brachypodium distachyon
Bradi1g53000 0.5kb downstream 0.5kb downstream 3260 true Bd1: 51568686-51571945 Brachypodium distachyon
Bradi1g53000 0.5kb downstream 0.5kb downstream 500 false Bd1: 51571446-51571945 Brachypodium distachyon
Bradi1g53000 1.0kb upstream 1.0kb upstream 3760 true Bd1: 51567686-51571445 Brachypodium distachyon
Bradi1g53000 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51567686-51568685 Brachypodium distachyon
Bradi1g53000 1.0kb downstream 1.0kb downstream 3760 true Bd1: 51568686-51572445 Brachypodium distachyon
Bradi1g53000 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51571446-51572445 Brachypodium distachyon
Bradi1g53000 2.0kb upstream 2.0kb upstream 4760 true Bd1: 51566686-51571445 Brachypodium distachyon
Bradi1g53000 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51566686-51568685 Brachypodium distachyon
Bradi1g53000 2.0kb downstream 2.0kb downstream 4760 true Bd1: 51568686-51573445 Brachypodium distachyon
Bradi1g53000 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51571446-51573445 Brachypodium distachyon
Bradi1g53000 5.0kb upstream 5.0kb upstream 7760 true Bd1: 51563686-51571445 Brachypodium distachyon
Bradi1g53000 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51563686-51568685 Brachypodium distachyon
Bradi1g53000 5.0kb downstream 5.0kb downstream 7760 true Bd1: 51568686-51576445 Brachypodium distachyon
Bradi1g53000 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51571446-51576445 Brachypodium distachyon
Bradi1g53000 10.0kb upstream 10.0kb upstream 12760 true Bd1: 51558686-51571445 Brachypodium distachyon
Bradi1g53000 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51558686-51568685 Brachypodium distachyon
Bradi1g53000 10.0kb downstream 10.0kb downstream 12760 true Bd1: 51568686-51581445 Brachypodium distachyon
Bradi1g53000 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51571446-51581445 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579990 5269 Grass View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.017     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.216       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.017     Low  
cufflinks 0.016     Low  
cufflinks 0.028     Low  
cufflinks 0.035     Low  
cufflinks 0.005     Low Low
cufflinks 0.019     Low  
cufflinks 0.235       High

0 Strain