Gene : Bradi1g53132 B. distachyon v3.1
Defline:  (1 of 1) PF15072 - Domain of unknown function (DUF4539) (DUF4539) Genomic Order:  6658
Name:  ? Bradi1g53132 Secondary Identifier:  ? PAC:32792978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g53132 0.5kb upstream 0.5kb upstream 4672 true Bd1: 51670785-51675456 Brachypodium distachyon
Bradi1g53132 0.5kb upstream 0.5kb upstream 500 false Bd1: 51670785-51671284 Brachypodium distachyon
Bradi1g53132 0.5kb downstream 0.5kb downstream 4672 true Bd1: 51671285-51675956 Brachypodium distachyon
Bradi1g53132 0.5kb downstream 0.5kb downstream 500 false Bd1: 51675457-51675956 Brachypodium distachyon
Bradi1g53132 1.0kb upstream 1.0kb upstream 5172 true Bd1: 51670285-51675456 Brachypodium distachyon
Bradi1g53132 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51670285-51671284 Brachypodium distachyon
Bradi1g53132 1.0kb downstream 1.0kb downstream 5172 true Bd1: 51671285-51676456 Brachypodium distachyon
Bradi1g53132 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51675457-51676456 Brachypodium distachyon
Bradi1g53132 2.0kb upstream 2.0kb upstream 6172 true Bd1: 51669285-51675456 Brachypodium distachyon
Bradi1g53132 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51669285-51671284 Brachypodium distachyon
Bradi1g53132 2.0kb downstream 2.0kb downstream 6172 true Bd1: 51671285-51677456 Brachypodium distachyon
Bradi1g53132 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51675457-51677456 Brachypodium distachyon
Bradi1g53132 5.0kb upstream 5.0kb upstream 9172 true Bd1: 51666285-51675456 Brachypodium distachyon
Bradi1g53132 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51666285-51671284 Brachypodium distachyon
Bradi1g53132 5.0kb downstream 5.0kb downstream 9172 true Bd1: 51671285-51680456 Brachypodium distachyon
Bradi1g53132 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51675457-51680456 Brachypodium distachyon
Bradi1g53132 10.0kb upstream 10.0kb upstream 14172 true Bd1: 51661285-51675456 Brachypodium distachyon
Bradi1g53132 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51661285-51671284 Brachypodium distachyon
Bradi1g53132 10.0kb downstream 10.0kb downstream 14172 true Bd1: 51671285-51685456 Brachypodium distachyon
Bradi1g53132 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51675457-51685456 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583504 5269 Grass View MSA
122049874 5273 Angiosperm View MSA
121311625 5274 Embryophyte View MSA
123348898 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.109        
cufflinks 0.25        
cufflinks 0.16        
cufflinks 0.171        
cufflinks 0.019     Low Low
cufflinks 0.203        
cufflinks 0.228        
cufflinks 0.192        
cufflinks 0.26        
cufflinks 0.099     Low  
cufflinks 0.009     Low Low
cufflinks 0.184        
cufflinks 0.003     Low Low
cufflinks 0.011     Low Low
cufflinks 0.017     Low Low
cufflinks 0.193        
cufflinks 0.13     Low  
cufflinks 0.346       High
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.128        
cufflinks 0.215        
cufflinks 0.145        
cufflinks 0.171        
cufflinks 0.259        
cufflinks 0.129        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.192        
cufflinks 0.186        

0 Strain