Gene : Bradi1g53340 B. distachyon v3.1
Defline:  (1 of 1) PTHR21136:SF72 - VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 Genomic Order:  6684
Name:  ? Bradi1g53340 Secondary Identifier:  ? PAC:32806058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g53340 0.5kb upstream 0.5kb upstream 6903 true Bd1: 51872471-51879373 Brachypodium distachyon
Bradi1g53340 0.5kb upstream 0.5kb upstream 500 false Bd1: 51872471-51872970 Brachypodium distachyon
Bradi1g53340 0.5kb downstream 0.5kb downstream 6903 true Bd1: 51872971-51879873 Brachypodium distachyon
Bradi1g53340 0.5kb downstream 0.5kb downstream 500 false Bd1: 51879374-51879873 Brachypodium distachyon
Bradi1g53340 1.0kb upstream 1.0kb upstream 7403 true Bd1: 51871971-51879373 Brachypodium distachyon
Bradi1g53340 1.0kb upstream 1.0kb upstream 1000 false Bd1: 51871971-51872970 Brachypodium distachyon
Bradi1g53340 1.0kb downstream 1.0kb downstream 7403 true Bd1: 51872971-51880373 Brachypodium distachyon
Bradi1g53340 1.0kb downstream 1.0kb downstream 1000 false Bd1: 51879374-51880373 Brachypodium distachyon
Bradi1g53340 2.0kb upstream 2.0kb upstream 8403 true Bd1: 51870971-51879373 Brachypodium distachyon
Bradi1g53340 2.0kb upstream 2.0kb upstream 2000 false Bd1: 51870971-51872970 Brachypodium distachyon
Bradi1g53340 2.0kb downstream 2.0kb downstream 8403 true Bd1: 51872971-51881373 Brachypodium distachyon
Bradi1g53340 2.0kb downstream 2.0kb downstream 2000 false Bd1: 51879374-51881373 Brachypodium distachyon
Bradi1g53340 5.0kb upstream 5.0kb upstream 11403 true Bd1: 51867971-51879373 Brachypodium distachyon
Bradi1g53340 5.0kb upstream 5.0kb upstream 5000 false Bd1: 51867971-51872970 Brachypodium distachyon
Bradi1g53340 5.0kb downstream 5.0kb downstream 11403 true Bd1: 51872971-51884373 Brachypodium distachyon
Bradi1g53340 5.0kb downstream 5.0kb downstream 5000 false Bd1: 51879374-51884373 Brachypodium distachyon
Bradi1g53340 10.0kb upstream 10.0kb upstream 16403 true Bd1: 51862971-51879373 Brachypodium distachyon
Bradi1g53340 10.0kb upstream 10.0kb upstream 10000 false Bd1: 51862971-51872970 Brachypodium distachyon
Bradi1g53340 10.0kb downstream 10.0kb downstream 16403 true Bd1: 51872971-51889373 Brachypodium distachyon
Bradi1g53340 10.0kb downstream 10.0kb downstream 10000 false Bd1: 51879374-51889373 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573540 5269 Grass View MSA
122043607 5273 Angiosperm View MSA
121310156 5274 Embryophyte View MSA
123347724 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.471        
cufflinks 1.454        
cufflinks 1.486        
cufflinks 1.849        
cufflinks 1.558        
cufflinks 1.21        
cufflinks 1.318        
cufflinks 1.07        
cufflinks 1.212        
cufflinks 1.448        
cufflinks 0.513       Low
cufflinks 1.082        
cufflinks 0.646       Low
cufflinks 0.416       Low
cufflinks 1.092        
cufflinks 1.3        
cufflinks 2.1        
cufflinks 3.355       High
cufflinks 2.6       High
cufflinks 0.836        
cufflinks 4.778       High
cufflinks 1.307        
cufflinks 1.159        
cufflinks 1.115        
cufflinks 1.355        
cufflinks 1.562        
cufflinks 0.614       Low
cufflinks 1.511        
cufflinks 1.23        
cufflinks 2.825       High

0 Strain