Gene : Bradi1g53790 B. distachyon v3.1
Defline:  (1 of 1) K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Genomic Order:  6740
Name:  ? Bradi1g53790 Secondary Identifier:  ? PAC:32806510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g53790 0.5kb upstream 0.5kb upstream 2436 true Bd1: 52324193-52326628 Brachypodium distachyon
Bradi1g53790 0.5kb upstream 0.5kb upstream 500 false Bd1: 52326129-52326628 Brachypodium distachyon
Bradi1g53790 0.5kb downstream 0.5kb downstream 2436 true Bd1: 52323693-52326128 Brachypodium distachyon
Bradi1g53790 0.5kb downstream 0.5kb downstream 500 false Bd1: 52323693-52324192 Brachypodium distachyon
Bradi1g53790 1.0kb upstream 1.0kb upstream 2936 true Bd1: 52324193-52327128 Brachypodium distachyon
Bradi1g53790 1.0kb upstream 1.0kb upstream 1000 false Bd1: 52326129-52327128 Brachypodium distachyon
Bradi1g53790 1.0kb downstream 1.0kb downstream 2936 true Bd1: 52323193-52326128 Brachypodium distachyon
Bradi1g53790 1.0kb downstream 1.0kb downstream 1000 false Bd1: 52323193-52324192 Brachypodium distachyon
Bradi1g53790 2.0kb upstream 2.0kb upstream 3936 true Bd1: 52324193-52328128 Brachypodium distachyon
Bradi1g53790 2.0kb upstream 2.0kb upstream 2000 false Bd1: 52326129-52328128 Brachypodium distachyon
Bradi1g53790 2.0kb downstream 2.0kb downstream 3936 true Bd1: 52322193-52326128 Brachypodium distachyon
Bradi1g53790 2.0kb downstream 2.0kb downstream 2000 false Bd1: 52322193-52324192 Brachypodium distachyon
Bradi1g53790 5.0kb upstream 5.0kb upstream 6936 true Bd1: 52324193-52331128 Brachypodium distachyon
Bradi1g53790 5.0kb upstream 5.0kb upstream 5000 false Bd1: 52326129-52331128 Brachypodium distachyon
Bradi1g53790 5.0kb downstream 5.0kb downstream 6936 true Bd1: 52319193-52326128 Brachypodium distachyon
Bradi1g53790 5.0kb downstream 5.0kb downstream 5000 false Bd1: 52319193-52324192 Brachypodium distachyon
Bradi1g53790 10.0kb upstream 10.0kb upstream 11936 true Bd1: 52324193-52336128 Brachypodium distachyon
Bradi1g53790 10.0kb upstream 10.0kb upstream 10000 false Bd1: 52326129-52336128 Brachypodium distachyon
Bradi1g53790 10.0kb downstream 10.0kb downstream 11936 true Bd1: 52314193-52326128 Brachypodium distachyon
Bradi1g53790 10.0kb downstream 10.0kb downstream 10000 false Bd1: 52314193-52324192 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
124579733 5269 Grass View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.972        
cufflinks 12.673     High  
cufflinks 9.009        
cufflinks 10.171        
cufflinks 2.485       Low
cufflinks 10.77     High  
cufflinks 11.402     High  
cufflinks 7.885        
cufflinks 9.834     High  
cufflinks 5.898        
cufflinks 1.522       Low
cufflinks 7.984        
cufflinks 1.35       Low
cufflinks 1.68       Low
cufflinks 3.651        
cufflinks 12.837     High  
cufflinks 5.741        
cufflinks 25.375     High High
cufflinks 7.215        
cufflinks 0.87       Low
cufflinks 10.264        
cufflinks 6.209        
cufflinks 7.671        
cufflinks 7.163        
cufflinks 10.275     High  
cufflinks 5.371        
cufflinks 1.833       Low
cufflinks 5.723        
cufflinks 5.519        
cufflinks 15.111     High High

0 Strain