Gene : Bradi1g54493 B. distachyon v3.1
Defline:  (1 of 6) PTHR11759 - 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 Genomic Order:  6826
Name:  ? Bradi1g54493 Secondary Identifier:  ? PAC:32797311
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54493 0.5kb upstream 0.5kb upstream 821 true Bd1: 53035435-53036255 Brachypodium distachyon
Bradi1g54493 0.5kb upstream 0.5kb upstream 500 false Bd1: 53035435-53035934 Brachypodium distachyon
Bradi1g54493 0.5kb downstream 0.5kb downstream 821 true Bd1: 53035935-53036755 Brachypodium distachyon
Bradi1g54493 0.5kb downstream 0.5kb downstream 500 false Bd1: 53036256-53036755 Brachypodium distachyon
Bradi1g54493 1.0kb upstream 1.0kb upstream 1321 true Bd1: 53034935-53036255 Brachypodium distachyon
Bradi1g54493 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53034935-53035934 Brachypodium distachyon
Bradi1g54493 1.0kb downstream 1.0kb downstream 1321 true Bd1: 53035935-53037255 Brachypodium distachyon
Bradi1g54493 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53036256-53037255 Brachypodium distachyon
Bradi1g54493 2.0kb upstream 2.0kb upstream 2321 true Bd1: 53033935-53036255 Brachypodium distachyon
Bradi1g54493 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53033935-53035934 Brachypodium distachyon
Bradi1g54493 2.0kb downstream 2.0kb downstream 2321 true Bd1: 53035935-53038255 Brachypodium distachyon
Bradi1g54493 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53036256-53038255 Brachypodium distachyon
Bradi1g54493 5.0kb upstream 5.0kb upstream 5321 true Bd1: 53030935-53036255 Brachypodium distachyon
Bradi1g54493 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53030935-53035934 Brachypodium distachyon
Bradi1g54493 5.0kb downstream 5.0kb downstream 5321 true Bd1: 53035935-53041255 Brachypodium distachyon
Bradi1g54493 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53036256-53041255 Brachypodium distachyon
Bradi1g54493 10.0kb upstream 10.0kb upstream 10321 true Bd1: 53025935-53036255 Brachypodium distachyon
Bradi1g54493 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53025935-53035934 Brachypodium distachyon
Bradi1g54493 10.0kb downstream 10.0kb downstream 10321 true Bd1: 53035935-53046255 Brachypodium distachyon
Bradi1g54493 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53036256-53046255 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575852 5269 Grass View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low Low
cufflinks 0.039     Low  
cufflinks 0.079     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076     Low High

0 Strain