Gene : Bradi1g54610 B. distachyon v3.1
Defline:  (1 of 1) 5.4.2.3 - Phosphoacetylglucosamine mutase / N-acetylglucosamine-phosphate mutase Genomic Order:  6845
Name:  ? Bradi1g54610 Secondary Identifier:  ? PAC:32805666
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon UDPNACETYLGALSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54610 0.5kb upstream 0.5kb upstream 3094 true Bd1: 53141918-53145011 Brachypodium distachyon
Bradi1g54610 0.5kb upstream 0.5kb upstream 500 false Bd1: 53141918-53142417 Brachypodium distachyon
Bradi1g54610 0.5kb downstream 0.5kb downstream 3094 true Bd1: 53142418-53145511 Brachypodium distachyon
Bradi1g54610 0.5kb downstream 0.5kb downstream 500 false Bd1: 53145012-53145511 Brachypodium distachyon
Bradi1g54610 1.0kb upstream 1.0kb upstream 3594 true Bd1: 53141418-53145011 Brachypodium distachyon
Bradi1g54610 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53141418-53142417 Brachypodium distachyon
Bradi1g54610 1.0kb downstream 1.0kb downstream 3594 true Bd1: 53142418-53146011 Brachypodium distachyon
Bradi1g54610 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53145012-53146011 Brachypodium distachyon
Bradi1g54610 2.0kb upstream 2.0kb upstream 4594 true Bd1: 53140418-53145011 Brachypodium distachyon
Bradi1g54610 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53140418-53142417 Brachypodium distachyon
Bradi1g54610 2.0kb downstream 2.0kb downstream 4594 true Bd1: 53142418-53147011 Brachypodium distachyon
Bradi1g54610 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53145012-53147011 Brachypodium distachyon
Bradi1g54610 5.0kb upstream 5.0kb upstream 7594 true Bd1: 53137418-53145011 Brachypodium distachyon
Bradi1g54610 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53137418-53142417 Brachypodium distachyon
Bradi1g54610 5.0kb downstream 5.0kb downstream 7594 true Bd1: 53142418-53150011 Brachypodium distachyon
Bradi1g54610 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53145012-53150011 Brachypodium distachyon
Bradi1g54610 10.0kb upstream 10.0kb upstream 12594 true Bd1: 53132418-53145011 Brachypodium distachyon
Bradi1g54610 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53132418-53142417 Brachypodium distachyon
Bradi1g54610 10.0kb downstream 10.0kb downstream 12594 true Bd1: 53142418-53155011 Brachypodium distachyon
Bradi1g54610 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53145012-53155011 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577327 5269 Grass View MSA
122047489 5273 Angiosperm View MSA
121347673 5274 Embryophyte View MSA
123424967 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.551        
cufflinks 7.919        
cufflinks 6.848        
cufflinks 6.266        
cufflinks 2.734       Low
cufflinks 6.996        
cufflinks 6.272        
cufflinks 5.495        
cufflinks 6.295        
cufflinks 3.672        
cufflinks 3.131        
cufflinks 7.107        
cufflinks 2.932       Low
cufflinks 2.28       Low
cufflinks 4.325        
cufflinks 7.735        
cufflinks 6.41        
cufflinks 14.593     High High
cufflinks 5.588        
cufflinks 2.935       Low
cufflinks 6.392        
cufflinks 7.123        
cufflinks 5.176        
cufflinks 5.72        
cufflinks 5.949        
cufflinks 6.653        
cufflinks 3.245        
cufflinks 5.494        
cufflinks 6.17        
cufflinks 10.192       High

0 Strain